Motif IL_20897.1 Version IL_20897.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-6 | 4-7 | 4-8 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | ➜ | 4V88 | 0.0000 | A5 | LSU rRNA | G | 680 | U | 681 | U | 682 | U | 683 | G | 684 | * | C | 696 | A | 697 | U | 698 | A | 699 | C | 700 | cWW | cWW | ||||
| 2 | ➜ | 4V91 | 0.3139 | 1 | LSU rRNA | G | 680 | U | 681 | U | 682 | U | 683 | G | 684 | * | C | 696 | A | 697 | U | 698 | A | 699 | C | 700 | cWW | ntSH | ntHS | ncWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUUG*CAUAC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUU*AUA | 2 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-L-R-R-R-L-L-cWW
- Heat map statistics
- Min 0.31 | Avg 0.16 | Max 0.31
Coloring options: