#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2break 3 41-42-3
1 IL_4V88_2874V880.58702A5 LSU rRNAU1015G1018*U1034G1035cWWcWW
2 IL_5AJ3_0165AJ30.00005A SSU rRNAC290G296*C484G485cWWcWW
3 IL_4V88_4164V880.35955A6 SSU rRNAG616A622*U1104C1105cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UCCG*UG1
CGUAAAG*CG1
GUUAAAA*UC1
Non-Watson-Crick part of the motif
SequenceCounts
CC*1
GUAAA*1
UUAAA*1

Release history

Release2.0
Date2017-04-24
StatusNew id, no parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-cWW
    Heat map statistics
    Min 0.36 | Avg 0.39 | Max 0.81
    Help

    Coloring options:

    Copyright 2026 BGSU RNA group. Page generated in 0.1227 s