#SLoop idPDBDisc#Non-coreAnnotationChain(s) 1 2break 3 41-42-3
1 IL_3SN2_0023SN20.16121Single bulged CBG13C14*G18C20cWWcWW
2 IL_5F9R_0035F9R0.21371Single bulged UAG72C73*G76C78cWWcWW
3 IL_5FW3_0025FW30.21861AG54C55*G58C60cWWcWW
4 IL_4OO8_0054OO80.22511EG54C55*G58C60cWWcWW
5 IL_4ZT0_0044ZT00.21711Single bulged UDG54C55*G58C60cWWcWW
6 IL_4V19_0134V190.15531AG264C265*G309C311cWWcWW
7 IL_4V9F_0254V9F0.00001Single bulged A0A788C789*G856U858cWWcWW
8 IL_3J7Y_0133J7Y0.18031Single bulged A (H)AA1929C1930*G1973U1975cWWcWW
9 IL_3J9W_0243J9W0.23781AAG613U614*G641C643cWWcWW
10 IL_4V88_2724V880.27641Single bulged G (H)A5G859C861*G833U834cWWcWW
11 IL_4V91_0334V910.25191Single bulged G (H)1G859C861*G833U834cWWcWW
12 IL_3J7P_1043J7P0.340825G3811U3814*G3780C3781cWWcWW
13 IL_3J79_0863J790.25652Bulged stacked bases (H)AG2600U2603*G2569C2570cWWcWW
14 IL_3J9W_1443J9W0.31752Bulged stacked bases (H)BAG1993C1996*G1962C1963cWWcWW
15 IL_5J7L_3185J7L0.31052Bulged stacked basesDAG1964C1967*G1933C1934cWWcWW
16 IL_4IOA_0714IOA0.35702XG1947C1950*G1916C1917cWWcWW
17 IL_397D_001397D0.54203Multiple bulged basesB+AC39U40*A22G26cWWcWW
18 IL_1MJI_0011MJI0.66532CG51G54*C30C31cWWcWW
19 IL_5AJ0_1535AJ00.62302Multiple bulged bases (H)A2C4420U4421*A4479G4482cWWcWW
20 IL_5FDU_1005FDU0.795221AC2524G2525*C2583G2586cWWcWW
21 IL_5J7L_3415J7L0.90522DAC2512A2513*U2571G2574cWWcWW
22 IL_3J7Y_0543J7Y0.86852AC2999A3000*U3058G3061cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GC*GUC4
GCAC*GC3
AC*GAU2
GGC*GU2
GCAU*GC2
CA*UACG2
GC*GCC1
GC*GAC1
GU*GUC1
CU*AUCUG1
GAAG*CC1
CU*AACG1
CG*CACG1
Non-Watson-Crick part of the motif
SequenceCounts
*U5
CA*5
*AC4
*A3
G*2
*C1
*UCU1
AA*1

Release history

Release2.0
Date2017-04-24
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (10)
  • Bulged stacked bases (H) (2)
  • Single bulged G (H) (2)
  • Single bulged U (2)
  • Multiple bulged bases (1)
  • Single bulged A (H) (1)
  • Single bulged C (1)
  • Single bulged A (1)
  • Multiple bulged bases (H) (1)
  • Bulged stacked bases (1)
  • Basepair signature
    cWW-cWW
    Heat map statistics
    Min 0.06 | Avg 0.47 | Max 1.00
    Help

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