Description:
No description added yet.
Basepair signature:
cWW-cWW
Free text annotation:
No annotation provided yet.
Intraclusteral linkage
Min 0.06 | Avg 0.47 | Max 1.00
Help
#D - ordering by discrepancy relative to the exemplar, #S - ordering by similarity (same as in the heat map). More
#D#SLoop idPDBDiscBulges 1 2break 3 41-42-3
174V9F0.00001A788C789*G856U858cWWcWW
264V190.15531G264C265*G309C311cWWcWW
313SN20.16121G13C14*G18C20cWWcWW
483J7Y0.18031A1929C1930*G1973U1975cWWcWW
525F9R0.21371G72C73*G76C78cWWcWW
654ZT00.21711G54C55*G58C60cWWcWW
735FW30.21861G54C55*G58C60cWWcWW
844OO80.22511G54C55*G58C60cWWcWW
993J9W0.23781G613U614*G641C643cWWcWW
10114V910.25191G859C861*G833U834cWWcWW
11133J790.25652G2600U2603*G2569C2570cWWcWW
12104V880.27641G859C861*G833U834cWWcWW
13155J7L0.31052G1964C1967*G1933C1934cWWcWW
14143J9W0.31752G1993C1996*G1962C1963cWWcWW
15123J7P0.34082G3811U3814*G3780C3781cWWcWW
16164IOA0.35702G1947C1950*G1916C1917cWWcWW
1717397D0.54203C39U40*A22G26cWWcWW
18195AJ00.62302C4420U4421*A4479G4482cWWcWW
19181MJI0.66532G51G54*C30C31cWWcWW
20205FDU0.79522C2524G2525*C2583G2586cWWcWW
21223J7Y0.86852C2999A3000*U3058G3061cWWcWW
22215J7L0.90522C2512A2513*U2571G2574cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GC*GUC4
GCAC*GC3
AC*GAU2
CA*UACG2
GGC*GU2
GCAU*GC2
CG*CACG1
GC*GAC1
GAAG*CC1
CU*AACG1
GC*GCC1
CU*AUCUG1
GU*GUC1
Non-Watson-Crick part of the motif
SequenceCounts
CA*5
*U5
*AC4
*A3
G*2
AA*1
*C1
*UCU1

Release history

Release2.0
Date2017-04-24
StatusNew id, 2 parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Coloring options:

Mutual discrepancy heat map legend: