Motif IL_56358.1 Version IL_56358.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 1-15 | 2-14 | 3-10 | 3-13 | 4-5 | 5-12 | 6-9 | 7-8 | 10-11 | 11-13 | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | ➜ | 4V88 | 2 | A5 | LSU rRNA | G | 531 | A | 532 | A | 533 | G | 535 | U | 536 | A | 537 | G | 538 | * | U | 553 | A | 554 | U | 555 | U | 556 | A | 557 | A | 559 | G | 560 | C | 561 | cWW | cWW | tHW | ncWW | cSH | cWH | ntHS | cWW | cSH | cWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAUGUAG*UAUUAUAGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAUGUA*AUUAUAG | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-cWW-bif-tHW-cWH-cSH-cWH-cSH-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: