#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17ZHG|1|2 (rep)Small subunit ribosomal RNArRNA 16S, mRNAPyrococcus abyssi GE5ArchaeaRF01959High-resolution cryo-EM structure of Pyrococcus abyssi 30S ribosomal subunit bound to mRNA and initiator tRNA anticodon stem-loopElectron microscopy2.252022-06-29
26TH6|1|AaSmall subunit ribosomal RNA16S ribosomal RNAThermococcus kodakarensisArchaeaRF01959Cryo-EM Structure of T. kodakarensis 70S ribosomeElectron microscopy2.552020-07-29
37ZAI|1|2Small subunit ribosomal RNA16S rRNA, mRNAPyrococcus abyssi GE5ArchaeaRF01959Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A.Electron microscopy2.62022-07-13
47ZAH|1|2Small subunit ribosomal RNA16S rRNA, mRNAPyrococcus abyssi GE5ArchaeaRF01959Cryo-EM structure of an archaeal aIF5B bound to the ssu translation initiation complexElectron microscopy2.72022-08-03
56SKG|1|AaSmall subunit ribosomal RNA16S ribosomal RNAThermococcus kodakarensisArchaeaRF01959Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strainElectron microscopy2.652020-07-29
66TMF|1|ASmall subunit ribosomal RNA16S ribosomal RNAThermococcus celerArchaeaRF01959Structure of an archaeal ABCE1-bound ribosomal post-splitting complexElectron microscopy2.82020-02-12
77ZAG|1|2Small subunit ribosomal RNArRNA, mRNAPyrococcus abyssi GE5ArchaeaRF01959Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA,mRNA, aIF1A and the C-terminal domain of aIF5B.Electron microscopy2.772022-08-03
86SKF|1|AaSmall subunit ribosomal RNA16S rRNAThermococcus kodakarensisArchaeaRF01959Cryo-EM Structure of T. kodakarensis 70S ribosomeElectron microscopy2.952020-07-29
96SWC|1|2Small subunit ribosomal RNA16S ribosomal rRNA, mRNAPyrococcus abyssiArchaeaRF01959IC2B model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssiElectron microscopy3.32020-02-19
106SW9|1|2Small subunit ribosomal RNA16S ribosomal RNA, mRNAPyrococcus abyssiArchaeaRF01959IC2A model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssiElectron microscopy4.22020-02-19
115JB3|1|2Small subunit ribosomal RNA16S ribosomal RNA, mRNAPyrococcus abyssiArchaeaRF01959Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE conformationElectron microscopy5.342016-11-30
125JBH|1|2Small subunit ribosomal RNA16S ribosomal RNA, mRNAPyrococcus abyssiArchaeaRF01959Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-IN conformationElectron microscopy5.342016-12-07

Release history

Release3.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.332
Date2022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-24

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_40313.4NR_20.0_40313.33.242(10) 6SW9|1|2, 6SKG|1|Aa, 6SKF|1|Aa, 5JBH|1|2, 5JB3|1|2, 7ZHG|1|2, 7ZAI|1|2, 6TMF|1|A, 6TH6|1|Aa, 6SWC|1|2(2) 7ZAG|1|2, 7ZAH|1|2(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16SW9|1|2IC2A model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssiELECTRON MICROSCOPY4.21454
26SWC|1|2IC2B model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssiELECTRON MICROSCOPY3.31454
37ZAH|1|2Cryo-EM structure of an archaeal aIF5B bound to the ssu translation initiation complexELECTRON MICROSCOPY2.71429
47ZAG|1|2Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA,mRNA, aIF1A and the C-terminal domain of aIF5B.ELECTRON MICROSCOPY2.771429
57ZAI|1|2Cryo-EM structure of a Pyrococcus abyssi 30S bound to Met-initiator tRNA, mRNA and aIF1A.ELECTRON MICROSCOPY2.61429
67ZHG|1|2High-resolution cryo-EM structure of Pyrococcus abyssi 30S ribosomal subunit bound to mRNA and initiator tRNA anticodon stem-loopELECTRON MICROSCOPY2.251429
75JBH|1|2Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-IN conformationELECTRON MICROSCOPY5.341495
85JB3|1|2Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE conformationELECTRON MICROSCOPY5.341495
96TMF|1|AStructure of an archaeal ABCE1-bound ribosomal post-splitting complexELECTRON MICROSCOPY2.81485
106SKG|1|AaCryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strainELECTRON MICROSCOPY2.651399
116TH6|1|AaCryo-EM Structure of T. kodakarensis 70S ribosomeELECTRON MICROSCOPY2.551439
126SKF|1|AaCryo-EM Structure of T. kodakarensis 70S ribosomeELECTRON MICROSCOPY2.951385
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