#IFECompound(s)RNA source organismTitleMethodResolutionDate
16CAP|1|W+ 6CAP|1|Y (rep)RNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3'), RNA (5'-R(*UP*UP*UP*UP*UP*U)-3')Thermus thermophilusCrystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with SisomicinX-RAY DIFFRACTION3.42018-07-25
27DUI|1|W+ 7DUI|1|YRNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3'), RNA (5'-R(*UP*UP*UP*UP*UP*U)-3')Thermus thermophilusCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''PyrS boundX-RAY DIFFRACTION3.622022-01-12
37DUL|1|W+ 7DUL|1|YRNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3'), RNA (5'-R(*UP*UP*UP*UP*UP*U)-3')Thermus thermophilusCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N3''MS boundX-RAY DIFFRACTION3.622022-01-26
46CAQ|1|W+ 6CAQ|1|YRNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3'), RNA (5'-R(*UP*UP*UP*UP*UP*U)-3')Thermus thermophilusCrystal Structure of 30S ribosomal subunit from Thermus thermophilusX-RAY DIFFRACTION3.42018-07-25
54DR4|1|W+ 4DR4|1|V5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3', 5'-R(*UP*UP*U)-3'Thermus thermophilusCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, cognate transfer RNA anticodon stem-loop and multiple copies of paromomycin molecules boundX-RAY DIFFRACTION3.972012-11-14
61IBL|1|Y+ 1IBL|1|ZANTICODON STEM-LOOP OF PHENYLALANINE TRANSFER RNA, A-SITE MESSENGER RNA FRAGMENTSTRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITE AND WITH THE ANTIBIOTIC PAROMOMYCINX-RAY DIFFRACTION3.112001-05-04
76CAO|1|W+ 6CAO|1|YRNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3'), RNA (5'-R(*UP*UP*UP*UP*UP*U)-3')Thermus thermophilusStructure of the ribosomal decoding complex at ambient temperatureX-RAY DIFFRACTION3.452018-07-25
81IBM|1|Y+ 1IBM|1|ZANTICODON STEM-LOOP OF PHENYLALANINE TRANSFER RNA, A-SITE MESSENGER RNA FRAGMENTSTRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITEX-RAY DIFFRACTION3.312001-05-04
96CAS|1|W+ 6CAS|1|YRNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3'), RNA (5'-R(*UP*UP*UP*UP*UP*U)-3')Thermus thermophilusSerial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with N1MSX-RAY DIFFRACTION3.52018-07-25
104DR5|1|W+ 4DR5|1|V5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3', 5'-R(*UP*UP*U)-3'Thermus thermophilusCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, crystallographically disordered cognate transfer RNA anticodon stem-loop and streptomycin boundX-RAY DIFFRACTION3.452012-11-14
116CAR|1|W+ 6CAR|1|YRNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3'), RNA (5'-R(*UP*UP*UP*UP*UP*U)-3')Thermus thermophilusSerial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with SisomicinX-RAY DIFFRACTION3.42018-07-25
124AQY|1|Z+ 4AQY|1|W5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3', 5'-R(*UP*UP*CP*AP*AP*AP)-3'Thermus thermophilusStructure of ribosome-apramycin complexesX-RAY DIFFRACTION3.52012-07-18
137DUK|1|W+ 7DUK|1|YRNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3'), RNA (5'-R(*UP*UP*UP*UP*UP*U)-3')Thermus thermophilusCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1,3''MS boundX-RAY DIFFRACTION3.62022-01-12
147DUG|1|W+ 7DUG|1|YRNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3'), RNA (5'-R(UPUPUPUPUPU)-3')Thermus thermophilusCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''TFMS boundX-RAY DIFFRACTION3.752022-01-12
157DUJ|1|W+ 7DUJ|1|YRNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3'), RNA (5'-R(*UP*UP*UP*UP*UP*U)-3')Thermus thermophilusCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1,3''Bz boundX-RAY DIFFRACTION3.752022-01-12
167DUH|1|WRNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3')Thermus thermophilusCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''AC boundX-RAY DIFFRACTION3.752022-01-26

Release history

Release3.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.248
Date2022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-14

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14DR4|1|W+4DR4|1|VCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, cognate transfer RNA anticodon stem-loop and multiple copies of paromomycin molecules boundX-RAY DIFFRACTION3.9715
26CAR|1|W+6CAR|1|YSerial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with SisomicinX-RAY DIFFRACTION3.415
36CAS|1|W+6CAS|1|YSerial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with N1MSX-RAY DIFFRACTION3.515
46CAQ|1|W+6CAQ|1|YCrystal Structure of 30S ribosomal subunit from Thermus thermophilusX-RAY DIFFRACTION3.415
56CAP|1|W+6CAP|1|YCrystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with SisomicinX-RAY DIFFRACTION3.415
67DUK|1|W+7DUK|1|YCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1,3''MS boundX-RAY DIFFRACTION3.615
77DUI|1|W+7DUI|1|YCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''PyrS boundX-RAY DIFFRACTION3.6215
87DUG|1|W+7DUG|1|YCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''TFMS boundX-RAY DIFFRACTION3.7515
97DUL|1|W+7DUL|1|YCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N3''MS boundX-RAY DIFFRACTION3.6215
107DUJ|1|W+7DUJ|1|YCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1,3''Bz boundX-RAY DIFFRACTION3.7515
117DUH|1|WCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with mRNA and cognate transfer RNA anticodon stem-loop and sisomicin derivative N1''AC boundX-RAY DIFFRACTION3.7515
126CAO|1|W+6CAO|1|YStructure of the ribosomal decoding complex at ambient temperatureX-RAY DIFFRACTION3.4515
131IBM|1|Y+1IBM|1|ZSTRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITEX-RAY DIFFRACTION3.3111
144DR5|1|W+4DR5|1|VCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, crystallographically disordered cognate transfer RNA anticodon stem-loop and streptomycin boundX-RAY DIFFRACTION3.4515
151IBL|1|Y+1IBL|1|ZSTRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITE AND WITH THE ANTIBIOTIC PAROMOMYCINX-RAY DIFFRACTION3.1115
164AQY|1|Z+4AQY|1|WStructure of ribosome-apramycin complexesX-RAY DIFFRACTION3.515