#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14V8U|1|CV (rep)Transfer RNAMRNA, RNAThermus thermophilusBacteriaRF00005Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-ray diffraction3.72014-07-09
24V8U|1|AVTransfer RNAMRNA, RNAThermus thermophilusBacteriaRF00005Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-ray diffraction3.72014-07-09
34V90|1|AVTransfer RNARNA (77-MER), 5'-R(*UP*AP*AP*AP*AP*AP*UP*GP*UP)-3'Thermus thermophilusBacteriaRF00005Thermus thermophilus RibosomeX-ray diffraction2.952014-07-09
43BBV|1|zTransfer RNAtRNA(Phe)Thermus thermophilusBacteriaRF00005The tRNA(phe) fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complexElectron microscopy102008-10-21
54V68|1|AWTransfer RNAE-SITE TRNAThermus thermophilusBacteriaRF00005T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.Electron microscopy6.42014-07-09
64WT8|1|D3Transfer RNAA site tNA, E site tNAThermus thermophilusBacteriaRF00005Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-ray diffraction3.42015-01-21
75AA0|1|BETransfer RNAtRNA chain 2Thermus thermophilusBacteriaRF00005Complex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCPElectron microscopy52015-10-14
85AA0|1|BCTransfer RNAtRNA chain 1Thermus thermophilusBacteriaRF00005Complex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCPElectron microscopy52015-10-14
93J9Z|1|S7Transfer RNAE-tRNAThermus thermophilusBacteriaRF00005Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GElectron microscopy3.62015-07-01
104V5A|1|AV+ 4V5A|1|AXP-SITE RNA ASL-PHE, MRNAsynthetic constructStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-ray diffraction3.52014-07-09
114V5A|1|CV+ 4V5A|1|CXP-SITE RNA ASL-PHE, MRNAsynthetic constructStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-ray diffraction3.52014-07-09
124WT8|1|C3Transfer RNAA site tNA, E site tNAThermus thermophilusBacteriaRF00005Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-ray diffraction3.42015-01-21
134WT8|1|C2Transfer RNAA site tNA, E site tNA, mRNAThermus thermophilusBacteriaRF00005Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-ray diffraction3.42015-01-21
145AA0|1|BDTransfer RNAtRNA chain 2Thermus thermophilusBacteriaRF00005Complex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCPElectron microscopy52015-10-14

Release history

Release2.452.462.472.482.492.502.512.522.532.542.552.562.572.582.592.602.612.622.632.642.652.662.672.682.692.702.712.722.732.742.752.76
Date2015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-182015-12-252016-01-012016-01-082016-01-152016-01-222016-01-292016-02-052016-02-122016-02-192016-02-262016-03-042016-03-112016-03-182016-03-252016-04-012016-04-082016-04-152016-04-222016-04-292016-05-062016-05-132016-05-20

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_95556.4NR_all_95556.32.45(11) 4WT8|1|C3, 4WT8|1|C2, 4V90|1|AV, 4V8U|1|CV, 4V8U|1|AV, 4V68|1|AW, 4V5A|1|CV+4V5A|1|CX, 4V5A|1|AV+4V5A|1|AX, 3J9Z|1|S7, 3BBV|1|z, 4WT8|1|D3(3) 5AA0|1|BD, 5AA0|1|BC, 5AA0|1|BE(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13J9Z|1|S7Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor GELECTRON MICROSCOPY3.674
24WT8|1|C3Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-RAY DIFFRACTION3.476
34WT8|1|D3Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-RAY DIFFRACTION3.476
44V68|1|AWT. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.ELECTRON MICROSCOPY6.476
55AA0|1|BCComplex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCPELECTRON MICROSCOPY576
64WT8|1|C2Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complexX-RAY DIFFRACTION3.475
75AA0|1|BDComplex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCPELECTRON MICROSCOPY575
83BBV|1|zThe tRNA(phe) fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complexELECTRON MICROSCOPY1067
94V8U|1|CVCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.776
104V8U|1|AVCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.776
114V5A|1|CV+4V5A|1|CXStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.517
125AA0|1|BEComplex of Thermous thermophilus ribosome (A-and P-site tRNA) bound to BipA-GDPCPELECTRON MICROSCOPY575
134V5A|1|AV+4V5A|1|AXStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.517
144V90|1|AVThermus thermophilus RibosomeX-RAY DIFFRACTION2.9576
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