#IFECompound(s)RNA source organismTitleMethodResolutionDate
11FJG|1|A (rep)16S RIBOSOMAL RNAThermus thermophilusSTRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCINX-RAY DIFFRACTION32000-09-25
22UUA|1|A16S RRNAThermus thermophilusStructure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUC-codon in the A-site and paromomycin.X-RAY DIFFRACTION2.92007-05-15
31N32|1|A16S RIBOSOMAL RNAThermus thermophilusStructure of the Thermus thermophilus 30S ribosomal subunit bound to codon and near-cognate transfer RNA anticodon stem-loop mismatched at the first codon position at the a site with paromomycinX-RAY DIFFRACTION32002-11-29
44B3M|1|A16S RIBOSOMAL RNAThermus thermophilusCrystal structure of the 30S ribosome in complex with compound 1X-RAY DIFFRACTION2.92013-08-07
52UUB|1|A16S RRNAThermus thermophilusStructure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUU-codon in the A-site and paromomycin.X-RAY DIFFRACTION2.82007-05-15
62VQE|1|A16S RRNAThermus thermophilusModified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decodingX-RAY DIFFRACTION2.52008-04-29
75J8B|1|a16S Ribosomal RNAThermus thermophilusCrystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.62016-05-25
84W2I|1|AA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72014-10-15
94B3R|1|A16S RIBOSOMAL RNAThermus thermophilusCrystal structure of the 30S ribosome in complex with compound 30X-RAY DIFFRACTION32013-08-07
105FDV|1|1a16S ribosomal RNAThermus thermophilusCrystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-01-27
114W2I|1|CA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.72014-10-15
125J4C|1|1a16S ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.82016-04-27
134V9H|1|AA16S ribosomal RNAThermus thermophilusCrystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-RAY DIFFRACTION2.862014-07-09
144Y4O|1|1a16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.32015-03-18
152VQF|1|A16S RRNAThermus thermophilusModified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decodingX-RAY DIFFRACTION2.92008-04-29
164Z8C|1|1a16S ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.92015-05-20
174B3T|1|A16S RIBOSOMAL RNAThermus thermophilusCrystal structure of the 30S ribosome in complex with compound 39X-RAY DIFFRACTION32013-08-07
184Y4O|1|2a16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.32015-03-18
195FDU|1|1a16S ribosomal RNAThermus thermophilusCrystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.92016-01-27
201VY4|1|AA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62014-08-20
214W2G|1|AA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552014-10-15
225FDU|1|2a16S ribosomal RNAThermus thermophilusCrystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.92016-01-27
235J4B|1|1a16S ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.62016-04-27
244W2F|1|AA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
252UXC|1|A16S RIBOSOMAL RNAThermus thermophilusCrystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA UCGU in the context of the Thermus thermophilus 30S subunit.X-RAY DIFFRACTION2.92007-05-08
263T1Y|1|A16S rRNAThermus thermophilusStructure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA Lysine 3 (TRNALYS3) bound to an mRNA with an AAG-codon in the A-site and paromomycinX-RAY DIFFRACTION2.82012-01-25
271VY5|1|AA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552014-08-20
284W2E|1|a16S Ribosomal RNAThermus thermophilusCrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.92014-10-01
294W2F|1|CA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.42014-10-15
304WPO|1|DA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82015-01-28
315FDV|1|2a16S ribosomal RNAThermus thermophilusCrystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-01-27
325F8K|1|1a16S ribosomal RNAThermus thermophilusCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-02-03
334Z3S|1|1a16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.652015-06-03
341VY5|1|CA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.552014-08-20
355DOY|1|1a16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.62015-12-30
364W2G|1|CA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.552014-10-15
374WPO|1|BA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.82015-01-28
385W4K|1|1a16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.72017-08-30
394Y4P|1|1a16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52015-03-18
405DOY|1|2a16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.62015-12-30
411XMQ|1|A16s ribosomal RNAThermus thermophilusCrystal Structure of t6A37-ASLLysUUU AAA-mRNA Bound to the Decoding CenterX-RAY DIFFRACTION32004-12-14
425HAU|1|2a16S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION32016-04-06
434V8I|1|AA16S Ribosomal RNAThermus thermophilusCrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.72014-07-09
445J4B|1|2a16S ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.62016-04-27
454Z8C|1|2a16S ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.92015-05-20
465HCQ|1|1a16S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-04-06
475HCQ|1|2a16S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-04-06
485VP2|1|1a16S ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.82017-06-28
495HAU|1|1a16S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION32016-04-06
504LNT|1|QA16S rRNAThermus thermophilusCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.942014-08-06
515W4K|1|2a16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.72017-08-30
525HD1|1|2a16S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.72016-04-06
534V67|1|AA16S RRNAThermus thermophilusCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
544Z3S|1|2a16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.652015-06-03
554W2H|1|CA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.72014-10-15
565F8K|1|2a16S ribosomal RNAThermus thermophilusCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-02-03
575HCP|1|2a16S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.892016-04-06
584W2H|1|AA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.72014-10-15
594V8D|1|CA16S ribosomal RNAThermus thermophilusStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION32014-07-09
604V67|1|CA16S RRNAThermus thermophilusCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION32014-07-09
615J4C|1|2a16S ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.82016-04-27
624V8I|1|CA16S Ribosomal RNAThermus thermophilusCrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.72014-07-09
635HCR|1|2a16S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-04-06
644WQY|1|BA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.82015-01-28
654LNT|1|XA16S rRNAThermus thermophilusCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.942014-08-06
665HCR|1|1a16S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.82016-04-06
674V9R|1|CA16S Ribosomal RNAThermus thermophilusCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION32014-07-09
684Y4P|1|2a16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.52015-03-18
691VY4|1|CA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.62014-08-20
701VY6|1|AA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.92014-08-20
714WQF|1|BA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.82015-01-28
725HCP|1|1a16S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.892016-04-06
735HD1|1|1a16S Ribosomal RNAThermus thermophilusCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.72016-04-06
744V8B|1|CA16S ribosomal RNAThermus thermophilusCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
751VY7|1|AA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.82014-08-20
764WQU|1|BA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.82015-01-28
774V8D|1|AA16S ribosomal RNAThermus thermophilusStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION32014-07-09
785VP2|1|2a16S ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.82017-06-28
794V9R|1|AA16S Ribosomal RNAThermus thermophilusCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION32014-07-09
801VY6|1|CA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.92014-08-20
815IBB|1|1G16S ribosomal RNA, mRNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.962016-05-25
825IB7|1|1316S ribosomal RNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.992016-05-25
831VY7|1|CA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.82014-08-20
844V8B|1|AA16S ribosomal RNAThermus thermophilusCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION32014-07-09
855IBB|1|1316S ribosomal RNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.962016-05-25
864WQY|1|DA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.82015-01-28
874WQF|1|DA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.82015-01-28
884V90|1|AA16S RIBOSOMAL RNAThermus thermophilusThermus thermophilus RibosomeX-RAY DIFFRACTION2.952014-07-09
895E81|1|1316S ribosomal RNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-RAY DIFFRACTION2.952016-01-27
904V51|1|CA16S ribosomal RNAThermus thermophilusStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.82014-07-09
914WQU|1|DA16S Ribosomal RNAThermus thermophilusCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.82015-01-28
925E81|1|1G16S ribosomal RNA, mRNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-RAY DIFFRACTION2.952016-01-27
934V51|1|AA16S ribosomal RNAThermus thermophilusStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.82014-07-09
944WSD|1|1316S ribosomal RNAThermus thermophilusComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.952015-06-10
954WSD|1|1G16S ribosomal RNAThermus thermophilusComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.952015-06-10
964V8G|1|CA16S Ribosomal RNAThermus thermophilusCrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION32014-07-09
974V7W|1|AA16S rRNAThermus thermophilusStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION32014-07-09
984V7W|1|CA16S rRNAThermus thermophilusStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION32014-07-09
995IB7|1|1G16S ribosomal RNAThermus thermophilusStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.992016-05-25
1004V7X|1|AA16S rRNAThermus thermophilusStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION32014-07-09
1014V7X|1|CA16S rRNAThermus thermophilusStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION32014-07-09
1024V7Y|1|CA16S rRNAThermus thermophilusStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION32014-07-09
1034V7Y|1|AA16S rRNAThermus thermophilusStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION32014-07-09
1044V8G|1|AA16S Ribosomal RNAThermus thermophilusCrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION32014-07-09
1054V7L|1|CA16S ribosomal RNAThermus thermophilusThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION32014-07-09
1064V7L|1|AA16S ribosomal RNAThermus thermophilusThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION32014-07-09

Release history

Release2.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.158
Date2017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-08

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
14V8G|1|AACrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION31505
24V90|1|AAThermus thermophilus RibosomeX-RAY DIFFRACTION2.951507
34V9H|1|AACrystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-RAY DIFFRACTION2.861514
41VY7|1|CACrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.81503
55FDU|1|2aCrystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.91492
65FDV|1|2aCrystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.81492
74Y4O|1|2aCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.31492
85F8K|1|2aCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.81492
94V9R|1|CACrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION31503
104Z8C|1|2aCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.91483
115HCQ|1|2aCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.81483
125HCR|1|2aCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.81483
135HCP|1|2aCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.891483
145HD1|1|2aCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.71483
154WQU|1|DACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.81501
164WQF|1|DACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.81501
174WQY|1|DACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.81501
185HAU|1|2aCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION31501
191VY6|1|CACrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.91503
204W2H|1|CACrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.71503
211VY4|1|CACrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.61503
221VY5|1|CACrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.551503
234WPO|1|DACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.81503
244W2F|1|CACrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.41503
254W2G|1|CACrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.551503
264W2I|1|CACrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.71503
275DOY|1|2aCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.61491
284Z3S|1|2aCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.651491
295W4K|1|2aCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.71491
305J4C|1|2aCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.81491
315J4B|1|2aCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.61491
325VP2|1|2aCrystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.81491
334Y4P|1|2aCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.51491
345HAU|1|1aCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION31495
354WQY|1|BACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.81495
364WQF|1|BACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.81495
374WQU|1|BACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.81495
384WPO|1|BACrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.81497
394Z8C|1|1aCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.91477
405HD1|1|1aCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.71477
415HCP|1|1aCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.891477
425HCR|1|1aCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.81477
435HCQ|1|1aCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.81477
444V9R|1|AACrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION31498
455F8K|1|1aCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.81488
465FDV|1|1aCrystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.81488
475FDU|1|1aCrystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.91488
484Y4O|1|1aCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.31488
495DOY|1|1aCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.61488
504Z3S|1|1aCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.651488
515J4C|1|1aCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.81488
525J4B|1|1aCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.61488
534Y4P|1|1aCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.51488
545W4K|1|1aCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.71488
555VP2|1|1aCrystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.81488
564W2F|1|AACrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.41497
574W2G|1|AACrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.551498
581VY5|1|AACrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.551498
591VY4|1|AACrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.61497
601VY6|1|AACrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.91498
614W2H|1|AACrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.71497
624W2I|1|AACrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.71496
631VY7|1|AACrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.81498
644V8I|1|AACrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.71493
655IB7|1|13Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.991499
665IBB|1|13Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.961496
675E81|1|13Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-RAY DIFFRACTION2.951496
684WSD|1|13Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.951498
694V8D|1|AAStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION31502
704V8B|1|AACrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION31506
714LNT|1|XACrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.941500
724V8D|1|CAStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION31502
734V8B|1|CACrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION31506
744WSD|1|1GComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.951498
755IB7|1|1GStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.991508
765E81|1|1GStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-RAY DIFFRACTION2.951506
775IBB|1|1GStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.961506
784LNT|1|QACrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.941500
794V7L|1|CAThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION31495
804V7L|1|AAThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION31495
814V51|1|CAStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.81504
824V51|1|AAStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.81504
834V7X|1|AAStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION31504
844V7Y|1|AAStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION31504
854V7W|1|AAStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION31504
864V7W|1|CAStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION31504
874V7X|1|CAStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION31504
884V7Y|1|CAStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION31504
894V8G|1|CACrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION31501
904V8I|1|CACrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.71491
914V67|1|CACrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION31504
924V67|1|AACrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION31504
934W2E|1|aCrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.91496
945J8B|1|aCrystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.61498
952UUB|1|AStructure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUU-codon in the A-site and paromomycin.X-RAY DIFFRACTION2.81512
964B3T|1|ACrystal structure of the 30S ribosome in complex with compound 39X-RAY DIFFRACTION31512
974B3M|1|ACrystal structure of the 30S ribosome in complex with compound 1X-RAY DIFFRACTION2.91512
984B3R|1|ACrystal structure of the 30S ribosome in complex with compound 30X-RAY DIFFRACTION31512
991N32|1|AStructure of the Thermus thermophilus 30S ribosomal subunit bound to codon and near-cognate transfer RNA anticodon stem-loop mismatched at the first codon position at the a site with paromomycinX-RAY DIFFRACTION31513
1002UUA|1|AStructure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUC-codon in the A-site and paromomycin.X-RAY DIFFRACTION2.91512
1012VQE|1|AModified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decodingX-RAY DIFFRACTION2.51513
1022VQF|1|AModified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decodingX-RAY DIFFRACTION2.91513
1031FJG|1|ASTRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCINX-RAY DIFFRACTION31507
1043T1Y|1|AStructure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA Lysine 3 (TRNALYS3) bound to an mRNA with an AAG-codon in the A-site and paromomycinX-RAY DIFFRACTION2.81513
1052UXC|1|ACrystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA UCGU in the context of the Thermus thermophilus 30S subunit.X-RAY DIFFRACTION2.91513
1061XMQ|1|ACrystal Structure of t6A37-ASLLysUUU AAA-mRNA Bound to the Decoding CenterX-RAY DIFFRACTION31507