Equivalence class NR_3.5_05217.4 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3HOY|1|P (rep) | 5'-R(*UP*AP*UP*AP*UP*GP*CP*A*UP*AP*AP*AP*GP*AP*CP*CP*AP*GP*GP*A)-3' | Complete RNA polymerase II elongation complex VI | X-ray diffraction | 3.4 | 2009-07-28 | ||||
| 2 | 5FLM|1|P | RNA, DNA-RNA ELONGATION SCAFFOLD | synthetic construct | Structure of transcribing mammalian RNA polymerase II | Electron microscopy | 3.4 | 2016-01-20 | |||
| 3 | 8HIM|1|P | RNA (5'-R(*UP*AP*UP*AP*UP*GP*CP*AP*UP*AP*AP*AP*GP*AP*CP*CP*AP*GP*GP*C)-3') | Brassica oleracea | A cryo-EM structure of B. oleracea RNA polymerase V elongation complex at 2.73 Angstrom | Electron microscopy | 2.8 | 2023-03-22 | |||
| 4 | 6HLR|1|R | RNA | Saccharomyces cerevisiae | Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP (core focused) | Electron microscopy | 3.18 | 2019-04-03 | |||
| 5 | 6HLQ|1|R | RNA | Saccharomyces cerevisiae | Yeast RNA polymerase I* elongation complex bound to nucleotide analog GMPCPP | Electron microscopy | 3.18 | 2019-04-03 | |||
| 6 | 6HKO|1|R | RNA | Saccharomyces cerevisiae | Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP | Electron microscopy | 3.42 | 2019-04-03 |
Release history
Parents
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5FLM|1|P | Structure of transcribing mammalian RNA polymerase II | ELECTRON MICROSCOPY | 3.4 | 14 |
| 2 | 6HKO|1|R | Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP | ELECTRON MICROSCOPY | 3.42 | 9 |
| 3 | 6HLR|1|R | Yeast RNA polymerase I elongation complex bound to nucleotide analog GMPCPP (core focused) | ELECTRON MICROSCOPY | 3.18 | 9 |
| 4 | 6HLQ|1|R | Yeast RNA polymerase I* elongation complex bound to nucleotide analog GMPCPP | ELECTRON MICROSCOPY | 3.18 | 9 |
| 5 | 8HIM|1|P | A cryo-EM structure of B. oleracea RNA polymerase V elongation complex at 2.73 Angstrom | ELECTRON MICROSCOPY | 2.8 | 11 |
| 6 | 3HOY|1|P | Complete RNA polymerase II elongation complex VI | X-RAY DIFFRACTION | 3.4 | 10 |