#IFECompound(s)RNA source organismTitleMethodResolutionDate
17OF0|1|A (rep)16S ribosomal RNAStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset1).ELECTRON MICROSCOPY2.22021-06-09
26ZM6|1|A16S mitochondrial rRNAHuman mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAELECTRON MICROSCOPY2.592021-01-13
37O9M|1|A16S rRNAHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU moduleELECTRON MICROSCOPY2.52021-06-30
47OF6|1|A16S ribosomal RNAStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 2).ELECTRON MICROSCOPY2.62021-06-09
57OF4|1|A16S ribosomal RNAStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).ELECTRON MICROSCOPY2.72021-06-09
66ZM5|1|A16S mitochondrial rRNAHuman mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideELECTRON MICROSCOPY2.892021-01-13
77OF7|1|A16S ribosomal RNAStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).ELECTRON MICROSCOPY2.52021-06-23
86VMI|1|A16s rRNAHomo sapiensStructure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)ELECTRON MICROSCOPY2.962020-08-05
96VLZ|1|A16s rRNAHomo sapiensStructure of the human mitochondrial ribosome-EF-G1 complex (ClassI)ELECTRON MICROSCOPY2.972020-08-05
107OF2|1|A16S ribosomal RNAStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.ELECTRON MICROSCOPY2.72021-06-02
117OF3|1|A16S ribosomal RNAStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).ELECTRON MICROSCOPY2.72021-05-19
127L20|1|A16S rRNA mitochondrialCryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.ELECTRON MICROSCOPY3.152021-05-12
137ODR|1|A16S mitochondrial rRNA, DNA (31-MER),16S mitochondrial rRNAState A of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY2.92021-06-23
147A5J|1|A16S rRNAStructure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAsELECTRON MICROSCOPY3.12020-12-23
157OF5|1|A16S ribosomal RNAStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).ELECTRON MICROSCOPY2.92021-06-09
167ODT|1|A16S mitochondrial rRNAState C of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY3.12021-06-23
177O9K|1|A16S rRNAHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-TuELECTRON MICROSCOPY3.12021-06-30
185OOL|1|A16S ribosomal RNAHomo sapiensStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAELECTRON MICROSCOPY3.062017-09-13
197ODS|1|A16S mitochondrial rRNA, DNA (30-MER),16S mitochondrial rRNAState B of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY3.12021-06-23
207OIC|1|A16S rRNACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4ELECTRON MICROSCOPY3.12021-09-15
217A5H|1|A16S rRNAStructure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1ELECTRON MICROSCOPY3.32020-12-23
227L08|1|A16S RRNACryo-EM structure of the human 55S mitoribosome-RRFmt complex.ELECTRON MICROSCOPY3.492021-05-12
237OIE|1|A16S rRNACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5BELECTRON MICROSCOPY3.52021-09-15
246ZSC|1|XA16S rRNAHomo sapiensHuman mitochondrial ribosome in complex with E-site tRNAELECTRON MICROSCOPY3.52020-09-16
253J9M|1|A16S rRNAHomo sapiensStructure of the human mitochondrial ribosome (class 1)ELECTRON MICROSCOPY3.52015-04-15
265OOM|1|A16S ribosomal RNAHomo sapiensStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAELECTRON MICROSCOPY3.032017-09-13
277OIA|1|A16S rRNACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3CELECTRON MICROSCOPY3.22021-09-15
283J7Y|1|A16S rRNAHomo sapiensStructure of the large ribosomal subunit from human mitochondriaELECTRON MICROSCOPY3.42014-10-15
297OIB|1|A16S rRNACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3DELECTRON MICROSCOPY3.32021-09-15
307OI9|1|A16S rRNACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3BELECTRON MICROSCOPY3.32021-09-15
317OI8|1|A16S rRNACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3AELECTRON MICROSCOPY3.52021-09-15
327OI7|1|A16S rRNACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2ELECTRON MICROSCOPY3.52021-09-15

Release history

Release3.196
Date2021-09-15

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16VMI|1|AStructure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)ELECTRON MICROSCOPY2.961527
26VLZ|1|AStructure of the human mitochondrial ribosome-EF-G1 complex (ClassI)ELECTRON MICROSCOPY2.971527
37L08|1|ACryo-EM structure of the human 55S mitoribosome-RRFmt complex.ELECTRON MICROSCOPY3.491527
47L20|1|ACryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.ELECTRON MICROSCOPY3.151527
57OIC|1|ACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 4ELECTRON MICROSCOPY3.11385
67OIE|1|ACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 5BELECTRON MICROSCOPY3.51472
73J9M|1|AStructure of the human mitochondrial ribosome (class 1)ELECTRON MICROSCOPY3.51472
83J7Y|1|AStructure of the large ribosomal subunit from human mitochondriaELECTRON MICROSCOPY3.41473
95OOL|1|AStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAELECTRON MICROSCOPY3.061441
107A5J|1|AStructure of the split human mitoribosomal large subunit with P-and E-site mt-tRNAsELECTRON MICROSCOPY3.11492
117A5H|1|AStructure of the split human mitoribosomal large subunit with rescue factors mtRF-R and MTRES1ELECTRON MICROSCOPY3.31457
126ZSC|1|XAHuman mitochondrial ribosome in complex with E-site tRNAELECTRON MICROSCOPY3.51501
136ZM6|1|AHuman mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAELECTRON MICROSCOPY2.591531
146ZM5|1|AHuman mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideELECTRON MICROSCOPY2.891534
157OF6|1|AStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 2).ELECTRON MICROSCOPY2.61460
167OF4|1|AStructure of mature human mitochondrial ribosome large subunit in complex with GTPBP6 (PTC conformation 1).ELECTRON MICROSCOPY2.71460
177OF2|1|AStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with GTPBP6.ELECTRON MICROSCOPY2.71407
187OF5|1|AStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset2).ELECTRON MICROSCOPY2.91386
197OF7|1|AStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 and GTPBP5 (dataset1).ELECTRON MICROSCOPY2.51373
207ODT|1|AState C of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY3.11451
217OI7|1|ACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 2ELECTRON MICROSCOPY3.51054
227OI9|1|ACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3BELECTRON MICROSCOPY3.31092
237OIB|1|ACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3DELECTRON MICROSCOPY3.31092
247OIA|1|ACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3CELECTRON MICROSCOPY3.21092
257OI8|1|ACryo-EM structure of late human 39S mitoribosome assembly intermediates, state 3AELECTRON MICROSCOPY3.51092
265OOM|1|AStructure of a native assembly intermediate of the human mitochondrial ribosome with unfolded interfacial rRNAELECTRON MICROSCOPY3.031092
277OF0|1|AStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset1).ELECTRON MICROSCOPY2.21376
287OF3|1|AStructure of a human mitochondrial ribosome large subunit assembly intermediate in complex with MTERF4-NSUN4 (dataset2).ELECTRON MICROSCOPY2.71386
297ODR|1|AState A of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY2.91417
307ODS|1|AState B of the human mitoribosomal large subunit assembly intermediateELECTRON MICROSCOPY3.11414
317O9M|1|AHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1 and the MALSU moduleELECTRON MICROSCOPY2.51453
327O9K|1|AHuman mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-TuELECTRON MICROSCOPY3.11435