Equivalence class NR_3.5_26052.4 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5NEW|1|H (rep) | RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3') | Escherichia coli | RNA-RNA base stacking in the crystal structure of an Hfq6:RNA dimer | X-ray diffraction | 2.51 | 2017-10-04 | |||
| 2 | 6NUT|1|D | RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3') | Homo sapiens | Ebola virus nucleoprotein - RNA complex | Electron microscopy | 3.1 | 2019-05-01 | |||
| 3 | 6H5Q|1|R | RNA (5'-R(*AP*AP*AP*AP*AP*A)-3') | synthetic construct | Cryo-EM structure of in vitro assembled Measles virus N into nucleocapsid-like particles (NCLPs) bound to polyA RNA hexamers. | Electron microscopy | 3.3 | 2019-03-13 |
Release history
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_3.5_26052.4 | NR_3.5_26052.3 | 3.72 | (2) 6H5Q|1|R, 5NEW|1|H | (1) 6NUT|1|D | (0) |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6NUT|1|D | Ebola virus nucleoprotein - RNA complex | ELECTRON MICROSCOPY | 3.1 | 6 |
| 2 | 6H5Q|1|R | Cryo-EM structure of in vitro assembled Measles virus N into nucleocapsid-like particles (NCLPs) bound to polyA RNA hexamers. | ELECTRON MICROSCOPY | 3.3 | 6 |
| 3 | 5NEW|1|H | RNA-RNA base stacking in the crystal structure of an Hfq6:RNA dimer | X-RAY DIFFRACTION | 2.51 | 6 |