#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
12YGH|1|A (rep)SAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162SAM-I riboswitch with a G2nA mutation in the Kink turn in complex with S-adenosylmethionineX-ray diffraction2.62011-09-07
23GX5|1|ARNA (94-MER)Crystal structure of T. tencongensis SAM-I riboswitch variant A94G/U34 bound with SAMX-ray diffraction2.42010-01-12
33GX3|1|ARNA (94-MER)Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAHX-ray diffraction2.72010-01-12
43IQR|1|ASAM-I riboswitchSAM-I riboswitch from T. tencongensis variant A94G bound with SAMX-ray diffraction2.552010-08-04
53IQP|1|ASAM-I riboswitchSAM-I riboswitch from T. tencongensis variant A94G apo formX-ray diffraction2.92010-08-04
63GX7|1|ARNA (94-MER)Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G mutant A6C/U7G/A87C/U88G bound with SAMX-ray diffraction2.952010-01-12
73IQN|1|ASAM-I riboswitchFree-state structural transitions of the SAM-I riboswitchX-ray diffraction2.72010-08-04
82GIS|1|ASAM-I riboswitchStructure of the S-adenosylmethionine riboswitch mRNA regulatory elementX-ray diffraction2.92006-07-04
92YDH|1|ASAM riboswitchSAM-I RIBOSWITCHCaldanaerobacter subterraneusBacteriaRF00162Crystal structure of the SAM-I riboswitch A94G U34 G18U G19U variant in complex with SAMX-ray diffraction2.92011-09-07
103GX2|1|ARNA (94-MER)TteSAM-I riboswitch variant A94GU34C bound to sinefunginX-ray diffraction2.92010-01-12
113GX6|1|ARNA (94-MER)Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAM in manganese chlorideX-ray diffraction2.82010-01-12

Release history

Release2.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.1583.03.13.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.983.993.1003.1013.1023.1033.1043.1053.1063.1073.1083.1093.1103.1113.1123.1133.1143.1153.1163.1173.1183.1193.1203.1213.1223.1233.1243.1253.1263.1273.1283.1293.1303.1313.1323.1333.1343.1353.1363.1373.1383.1393.1403.1413.1423.1433.1443.1453.1463.1473.1483.1493.1503.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.1783.1793.180
Date2017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-082017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-232019-10-302019-11-062019-11-132019-11-202019-11-272019-12-042019-12-112019-12-182019-12-252020-01-012020-01-082020-01-152020-01-222020-01-292020-02-052020-02-122020-02-192020-02-262020-03-042020-03-112020-03-182020-03-252020-04-012020-04-082020-04-152020-04-222020-04-292020-05-062020-05-132020-05-202020-05-272020-06-032020-06-102020-06-172020-06-242020-07-012020-07-082020-07-152020-07-222020-07-292020-08-052020-08-122020-08-192020-08-262020-09-022020-09-092020-09-162020-09-232020-09-302020-10-072020-10-142020-10-212020-10-282020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-122021-05-192021-05-26

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_82809.4NR_3.5_82809.32.137(10) 3IQR|1|A, 3IQP|1|A, 3IQN|1|A, 3GX7|1|A, 3GX6|1|A, 3GX5|1|A, 3GX3|1|A, 3GX2|1|A, 2YDH|1|A, 2GIS|1|A(1) 2YGH|1|A(0)

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
12YGH|1|ASAM-I riboswitch with a G2nA mutation in the Kink turn in complex with S-adenosylmethionineX-RAY DIFFRACTION2.694
23GX3|1|ACrystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAHX-RAY DIFFRACTION2.794
33GX7|1|ACrystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G mutant A6C/U7G/A87C/U88G bound with SAMX-RAY DIFFRACTION2.9594
43GX6|1|ACrystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAM in manganese chlorideX-RAY DIFFRACTION2.894
52YDH|1|ACrystal structure of the SAM-I riboswitch A94G U34 G18U G19U variant in complex with SAMX-RAY DIFFRACTION2.994
63GX5|1|ACrystal structure of T. tencongensis SAM-I riboswitch variant A94G/U34 bound with SAMX-RAY DIFFRACTION2.494
73GX2|1|ATteSAM-I riboswitch variant A94GU34C bound to sinefunginX-RAY DIFFRACTION2.994
82GIS|1|AStructure of the S-adenosylmethionine riboswitch mRNA regulatory elementX-RAY DIFFRACTION2.994
93IQN|1|AFree-state structural transitions of the SAM-I riboswitchX-RAY DIFFRACTION2.794
103IQR|1|ASAM-I riboswitch from T. tencongensis variant A94G bound with SAMX-RAY DIFFRACTION2.5594
113IQP|1|ASAM-I riboswitch from T. tencongensis variant A94G apo formX-RAY DIFFRACTION2.994
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