#IFECompound(s)RNA source organismTitleMethodResolutionDate
16ZMI|1|S2 (rep)18S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.62020-08-19
26ZM7|1|S218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.72020-07-29
36ZLW|1|218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to the human 40S ribosomal subunitELECTRON MICROSCOPY2.62020-07-29
46ZVH|1|218S rRNAHomo sapiensEDF1-ribosome complexELECTRON MICROSCOPY2.92020-08-19
56Z6N|1|S218S rRNAHomo sapiensCryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.92020-07-29
66ZOJ|1|218S ribosomal RNAHomo sapiensSARS-CoV-2-Nsp1-40S complex, composite mapELECTRON MICROSCOPY2.82020-07-22
76ZP4|1|218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2ELECTRON MICROSCOPY2.92020-07-29
86ZXG|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State H1ELECTRON MICROSCOPY2.62020-12-02
96QZP|1|S218S rRNA (1740-MER)Homo sapiensHigh-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.92019-04-24
106ZME|1|S218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY32020-08-12
116Z6L|1|S218S rRNAHomo sapiensCryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY32020-07-29
126ZV6|1|218S ribosomal RNAHomo sapiensHuman RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage)ELECTRON MICROSCOPY2.92021-05-12
136ZON|1|218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 1ELECTRON MICROSCOPY32020-07-29
146ZXH|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State H2ELECTRON MICROSCOPY2.72020-12-16
157K5I|1|240S ribosomal rRNA18SHomo sapiensSARS-COV-2 nsp1 in complex with human 40S ribosomeELECTRON MICROSCOPY2.92020-10-14
166ZMO|1|S218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexELECTRON MICROSCOPY3.12020-08-19
176Z6M|1|S218S rRNAHomo sapiensCryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1ELECTRON MICROSCOPY3.12020-07-29
187MQA|1|L118S rRNAHomo sapiensCryo-EM structure of the human SSU processome, state post-A1ELECTRON MICROSCOPY2.72021-09-22
196ZXE|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State F2ELECTRON MICROSCOPY32020-12-02
206Y2L|1|S218S ribosomal RNAHomo sapiensStructure of human ribosome in POST stateELECTRON MICROSCOPY32020-04-15
216ZUO|1|2pre-18S ribosomal RNAHomo sapiensHuman RIO1(kd)-StHA late pre-40S particle, structural state A (pre 18S rRNA cleavage)ELECTRON MICROSCOPY3.12021-05-12
226XA1|1|S218S rRNAHomo sapiensStructure of a drug-like compound stalled human translation termination complexELECTRON MICROSCOPY2.82020-10-07
236OM0|1|S218S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.12019-06-19
246OLE|1|S218S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.12019-06-19
256ZN5|1|218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complex - state 2ELECTRON MICROSCOPY3.22020-07-29
266ZXD|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State F1ELECTRON MICROSCOPY3.22020-12-02
276Y0G|1|S218S ribosomal RNAHomo sapiensStructure of human ribosome in classical-PRE stateELECTRON MICROSCOPY3.22020-04-15
286ZMT|1|218S ribosomal RNAHomo sapiensSARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complexELECTRON MICROSCOPY32020-08-19
297A09|1|218S ribosomal RNAHomo sapiensStructure of a human ABCE1-bound 43S pre-initiation complex - State IIIELECTRON MICROSCOPY3.52020-10-14
306OLG|1|B118S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)ELECTRON MICROSCOPY3.42019-06-19
317TQL|1|218S ribosomal RNAHomo sapiensCryoEM structure of the human 40S small ribosomal subunit in complex with translation initiation factors eIF1A and eIF5B.ELECTRON MICROSCOPY3.42022-04-27
326OLI|1|S218S ribosomal RNAHomo sapiensStructure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)ELECTRON MICROSCOPY3.52019-06-19
337QP7|1|A18S rRNAHomo sapiensStructure of the human 48S initiation complex in closed state (h48S AUG closed)ELECTRON MICROSCOPY3.72022-05-11
346ZMW|1|A18S rRNAHomo sapiensStructure of a human 48S translational initiation complexELECTRON MICROSCOPY3.72020-09-23
356Y57|1|S218S ribosomal RNAHomo sapiensStructure of human ribosome in hybrid-PRE stateELECTRON MICROSCOPY3.52020-04-15
366ZVJ|1|218S ribosomal RNAHomo sapiensStructure of a human ABCE1-bound 43S pre-initiation complex - State IIELECTRON MICROSCOPY3.82020-10-07
376G18|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State CELECTRON MICROSCOPY3.62018-06-06
386G5I|1|218S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State RELECTRON MICROSCOPY3.52018-06-06
394UG0|1|S218S ribosomal RNAHomo sapiensSTRUCTURE OF THE HUMAN 80S RIBOSOMEELECTRON MICROSCOPY3.62015-06-10
406ZXF|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State GELECTRON MICROSCOPY3.72020-12-02
416IP8|1|2m18S ribosomal RNAHomo sapiensCryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)ELECTRON MICROSCOPY3.92019-05-29
426IP5|1|2m18S ribosomal RNAHomo sapiensCryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)ELECTRON MICROSCOPY3.92019-05-29
436G5H|1|218S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - MatureELECTRON MICROSCOPY3.62018-06-06
446ZOK|1|218S ribosomal RNAHomo sapiensSARS-CoV-2-Nsp1-40S complex, focused on bodyELECTRON MICROSCOPY2.82020-07-29
456OM7|1|S218S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsELECTRON MICROSCOPY3.72019-06-19
466OLZ|1|B118S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAELECTRON MICROSCOPY3.92019-06-19
475AJ0|1|B118S ribosomal RNAHomo sapiensCryo electron microscopy of actively translating human polysomes (POST state).ELECTRON MICROSCOPY3.52015-05-20
486OLF|1|S218S ribosomal RNAHomo sapiensHuman ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsELECTRON MICROSCOPY3.92019-06-19
495A2Q|1|218S RRNAHomo sapiensStructure of the HCV IRES bound to the human ribosomeELECTRON MICROSCOPY3.92015-07-15
506YBW|1|A18S rRNAHomo sapiensStructure of a human 48S translational initiation complex - 40S bodyELECTRON MICROSCOPY3.12020-09-16
516G4S|1|2pre-18S ribosomal RNAHomo sapiensCryo-EM structure of a late human pre-40S ribosomal subunit - State BELECTRON MICROSCOPY42018-06-06
525LKS|1|S218S ribosomal RNAHomo sapiensStructure-function insights reveal the human ribosome as a cancer target for antibioticsELECTRON MICROSCOPY3.62017-04-26
537MQ8|1|L118S rRNAHomo sapiensCryo-EM structure of the human SSU processome, state pre-A1ELECTRON MICROSCOPY3.62021-09-22
547MQ9|1|L118S rRNAHomo sapiensCryo-EM structure of the human SSU processome, state pre-A1*ELECTRON MICROSCOPY3.872021-09-22
556ZOL|1|218S ribosomal RNAHomo sapiensSARS-CoV-2-Nsp1-40S complex, focused on headELECTRON MICROSCOPY2.82020-07-22
565T2C|1|AA18S rRNAHomo sapiensCryoEM structure of the human ribosome at 3.6 Angstrom resolutionELECTRON MICROSCOPY3.62017-01-25
575A8L|1|BHUMAN 18S RIBOSOMAL RNAHomo sapiensHuman eRF1 and the hCMV nascent peptide in the translation termination complexELECTRON MICROSCOPY3.82015-12-02

Release history

Release3.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.248
Date2022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-14

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16G4S|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State BELECTRON MICROSCOPY41613
25A8L|1|BHuman eRF1 and the hCMV nascent peptide in the translation termination complexELECTRON MICROSCOPY3.867
36IP8|1|2mCryo-EM structure of the HCV IRES dependently initiated CMV-stalled 80S ribosome (Structure iv)ELECTRON MICROSCOPY3.91742
46IP5|1|2mCryo-EM structure of the CMV-stalled human 80S ribosome (Structure ii)ELECTRON MICROSCOPY3.91742
55LKS|1|S2Structure-function insights reveal the human ribosome as a cancer target for antibioticsELECTRON MICROSCOPY3.61742
64UG0|1|S2STRUCTURE OF THE HUMAN 80S RIBOSOMEELECTRON MICROSCOPY3.61742
75T2C|1|AACryoEM structure of the human ribosome at 3.6 Angstrom resolutionELECTRON MICROSCOPY3.61742
86OLZ|1|B1Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNAELECTRON MICROSCOPY3.91708
96OLG|1|B1Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)ELECTRON MICROSCOPY3.41708
105AJ0|1|B1Cryo electron microscopy of actively translating human polysomes (POST state).ELECTRON MICROSCOPY3.51708
117QP7|1|AStructure of the human 48S initiation complex in closed state (h48S AUG closed)ELECTRON MICROSCOPY3.71693
126OLF|1|S2Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AA and PE tRNAsELECTRON MICROSCOPY3.91680
136OLI|1|S2Structure of human ribosome nascent chain complex selectively stalled by a drug-like small molecule (USO1-RNC)ELECTRON MICROSCOPY3.51680
146OLE|1|S2Human ribosome nascent chain complex (CDH1-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.11680
156Y0G|1|S2Structure of human ribosome in classical-PRE stateELECTRON MICROSCOPY3.21697
166Y57|1|S2Structure of human ribosome in hybrid-PRE stateELECTRON MICROSCOPY3.51658
176Y2L|1|S2Structure of human ribosome in POST stateELECTRON MICROSCOPY31713
186XA1|1|S2Structure of a drug-like compound stalled human translation termination complexELECTRON MICROSCOPY2.81512
196ZVH|1|2EDF1-ribosome complexELECTRON MICROSCOPY2.91740
206QZP|1|S2High-resolution cryo-EM structure of the human 80S ribosomeELECTRON MICROSCOPY2.91707
216Z6N|1|S2Cryo-EM structure of human EBP1-80S ribosomes (focus on EBP1)ELECTRON MICROSCOPY2.91740
226Z6L|1|S2Cryo-EM structure of human CCDC124 bound to 80S ribosomesELECTRON MICROSCOPY31740
236ZMO|1|S2SARS-CoV-2 Nsp1 bound to the human LYAR-80S-eEF1a ribosome complexELECTRON MICROSCOPY3.11740
246ZMI|1|S2SARS-CoV-2 Nsp1 bound to the human LYAR-80S ribosome complexELECTRON MICROSCOPY2.61740
256ZM7|1|S2SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-EBP1 ribosome complexELECTRON MICROSCOPY2.71740
266ZME|1|S2SARS-CoV-2 Nsp1 bound to the human CCDC124-80S-eERF1 ribosome complexELECTRON MICROSCOPY31740
276ZN5|1|2SARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complex - state 2ELECTRON MICROSCOPY3.21671
287TQL|1|2CryoEM structure of the human 40S small ribosomal subunit in complex with translation initiation factors eIF1A and eIF5B.ELECTRON MICROSCOPY3.41656
296ZV6|1|2Human RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage)ELECTRON MICROSCOPY2.91681
306G5H|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - MatureELECTRON MICROSCOPY3.61665
316ZXG|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State H1ELECTRON MICROSCOPY2.61577
326ZXH|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State H2ELECTRON MICROSCOPY2.71577
336ZXF|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State GELECTRON MICROSCOPY3.71656
346YBW|1|AStructure of a human 48S translational initiation complex - 40S bodyELECTRON MICROSCOPY3.11196
356ZMW|1|AStructure of a human 48S translational initiation complexELECTRON MICROSCOPY3.71691
366Z6M|1|S2Cryo-EM structure of human 80S ribosomes bound to EBP1, eEF2 and SERBP1ELECTRON MICROSCOPY3.11740
376ZVJ|1|2Structure of a human ABCE1-bound 43S pre-initiation complex - State IIELECTRON MICROSCOPY3.81720
386ZON|1|2SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 1ELECTRON MICROSCOPY31721
395A2Q|1|2Structure of the HCV IRES bound to the human ribosomeELECTRON MICROSCOPY3.91665
406ZOK|1|2SARS-CoV-2-Nsp1-40S complex, focused on bodyELECTRON MICROSCOPY2.81232
416ZOJ|1|2SARS-CoV-2-Nsp1-40S complex, composite mapELECTRON MICROSCOPY2.81704
426ZOL|1|2SARS-CoV-2-Nsp1-40S complex, focused on headELECTRON MICROSCOPY2.8472
436ZLW|1|2SARS-CoV-2 Nsp1 bound to the human 40S ribosomal subunitELECTRON MICROSCOPY2.61665
447K5I|1|2SARS-COV-2 nsp1 in complex with human 40S ribosomeELECTRON MICROSCOPY2.91665
457A09|1|2Structure of a human ABCE1-bound 43S pre-initiation complex - State IIIELECTRON MICROSCOPY3.51721
466ZP4|1|2SARS-CoV-2 Nsp1 bound to a human 43S preinitiation ribosome complex - state 2ELECTRON MICROSCOPY2.91721
476ZMT|1|2SARS-CoV-2 Nsp1 bound to a pre-40S-like ribosome complexELECTRON MICROSCOPY31569
486ZXD|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State F1ELECTRON MICROSCOPY3.21645
496ZUO|1|2Human RIO1(kd)-StHA late pre-40S particle, structural state A (pre 18S rRNA cleavage)ELECTRON MICROSCOPY3.11665
506G5I|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State RELECTRON MICROSCOPY3.51657
516ZXE|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State F2ELECTRON MICROSCOPY31645
526G18|1|2Cryo-EM structure of a late human pre-40S ribosomal subunit - State CELECTRON MICROSCOPY3.61658
536OM7|1|S2Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAsELECTRON MICROSCOPY3.71680
546OM0|1|S2Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with AP and PE tRNAsELECTRON MICROSCOPY3.11680
557MQA|1|L1Cryo-EM structure of the human SSU processome, state post-A1ELECTRON MICROSCOPY2.71570
567MQ9|1|L1Cryo-EM structure of the human SSU processome, state pre-A1*ELECTRON MICROSCOPY3.871301
577MQ8|1|L1Cryo-EM structure of the human SSU processome, state pre-A1ELECTRON MICROSCOPY3.61301