Equivalence class NR_4.0_56101.1 Current
| # | IFE | Compound(s) | RNA source organism | Title | Method | Resolution | Date |
|---|---|---|---|---|---|---|---|
| 1 | 6SZS|1|x (rep) | P-site tRNA-Pro(CGG), mRNA | Escherichia coli | Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis | ELECTRON MICROSCOPY | 3.06 | 2019-12-04 |
| 2 | 5MGP|1|x | P-site tRNA, mRNA | Escherichia coli | Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs | ELECTRON MICROSCOPY | 3.1 | 2016-12-14 |
| 3 | 6ENU|1|x | Proline tRNA, mRNA | Escherichia coli | Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P) | ELECTRON MICROSCOPY | 3.1 | 2017-11-22 |
| 4 | 6ENF|1|x | proline tRNA, RNA (5'-R(P*CP*CP*G)-3'), mRNA | Escherichia coli | Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P | ELECTRON MICROSCOPY | 3.2 | 2017-11-22 |
| 5 | 6NUO|1|XV | P-site tRNA-Pro, mRNA | Escherichia coli | Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate) | X-RAY DIFFRACTION | 3.2 | 2020-10-14 |
| 6 | 6NUO|1|QV | P-site tRNA-Pro, mRNA | Escherichia coli | Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate) | X-RAY DIFFRACTION | 3.2 | 2020-10-14 |
| 7 | 6ENJ|1|x | Proline tRNA, mRNA | Escherichia coli | Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P) | ELECTRON MICROSCOPY | 3.7 | 2017-11-22 |
| 8 | 6ENJ|1|9 | Proline tRNA | Escherichia coli | Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P) | ELECTRON MICROSCOPY | 3.7 | 2017-11-22 |
| 9 | 6O3M|1|QV | P-site ASLPro, mRNA | Escherichia coli | Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate) | X-RAY DIFFRACTION | 3.97 | 2020-10-14 |
| 10 | 6O3M|1|XV | P-site ASLPro, mRNA | Escherichia coli | Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate) | X-RAY DIFFRACTION | 3.97 | 2020-10-14 |
Parents
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 6NUO|1|QV | Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate) | X-RAY DIFFRACTION | 3.2 | 76 |
| 2 | 6O3M|1|QV | Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate) | X-RAY DIFFRACTION | 3.97 | 77 |
| 3 | 6O3M|1|XV | Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate) | X-RAY DIFFRACTION | 3.97 | 77 |
| 4 | 6NUO|1|XV | Modified tRNA(Pro) bound to Thermus thermophilus 70S (cognate) | X-RAY DIFFRACTION | 3.2 | 76 |
| 5 | 6SZS|1|x | Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis | ELECTRON MICROSCOPY | 3.06 | 77 |
| 6 | 5MGP|1|x | Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs | ELECTRON MICROSCOPY | 3.1 | 77 |
| 7 | 6ENF|1|x | Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-P | ELECTRON MICROSCOPY | 3.2 | 77 |
| 8 | 6ENU|1|x | Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P) | ELECTRON MICROSCOPY | 3.1 | 77 |
| 9 | 6ENJ|1|x | Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P) | ELECTRON MICROSCOPY | 3.7 | 77 |
| 10 | 6ENJ|1|9 | Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P) | ELECTRON MICROSCOPY | 3.7 | 77 |