#IFECompound(s)RNA source organismTitleMethodResolutionDate
17O1A|1|B8 (rep)P-site tRNA-Pro, mRNAEscherichia coli K-12Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.42021-09-01
27O1C|1|B8P-site tRNA-Pro, mRNAEscherichia coli K-12Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.62021-09-01
37O19|1|B8P-site tRNA-Pro, mRNAEscherichia coli K-12Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.92021-09-01
46SZS|1|xP-site tRNA-Pro(CGG), mRNAEscherichia coliRelease factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisELECTRON MICROSCOPY3.062019-12-04
55MGP|1|xP-site tRNA, mRNAEscherichia coliStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.12016-12-14
66ENU|1|xProline tRNA, mRNAEscherichia coliPolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.12017-11-22
76ENF|1|xproline tRNA, RNA (5'-R(P*CP*CP*G)-3'), mRNAEscherichia coliCryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.22017-11-22
87CPJ|1|9P/P tRNA, mRNAEscherichia coliycbZ-stalled 70S ribosomeELECTRON MICROSCOPY3.32021-12-08
96NUO|1|XVP-site tRNA-Pro, mRNAEscherichia coliModified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)X-RAY DIFFRACTION3.22020-10-14
106NUO|1|QVP-site tRNA-Pro, mRNAEscherichia coliModified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)X-RAY DIFFRACTION3.22020-10-14
116ENJ|1|xProline tRNA, mRNAEscherichia coliPolyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)ELECTRON MICROSCOPY3.72017-11-22
126ENJ|1|9Proline tRNAEscherichia coliPolyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)ELECTRON MICROSCOPY3.72017-11-22
136O3M|1|QVP-site ASLPro, mRNAEscherichia coliUnmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)X-RAY DIFFRACTION3.972020-10-14
146O3M|1|XVP-site ASLPro, mRNAEscherichia coliUnmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)X-RAY DIFFRACTION3.972020-10-14

Release history

Release3.2083.2093.2103.2113.2123.2133.2143.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.242
Date2021-12-082021-12-152021-12-222021-12-292022-01-052022-01-122022-01-192022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-03

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_4.0_56101.3NR_4.0_56101.23.208(13) 7O19|1|B8, 6SZS|1|x, 6O3M|1|XV, 6O3M|1|QV, 6NUO|1|XV, 6NUO|1|QV, 6ENU|1|x, 6ENJ|1|x, 6ENJ|1|9, 6ENF|1|x, 5MGP|1|x, 7O1C|1|B8, 7O1A|1|B8(1) 7CPJ|1|9(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_4.0_56101.3NR_4.0_56101.43.243(14) 7O19|1|B8, 5MGP|1|x, 6NUO|1|XV, 6NUO|1|QV, 7CPJ|1|9, 6ENU|1|x, 6SZS|1|x, 6ENJ|1|x, 6O3M|1|XV, 7O1C|1|B8, 6ENJ|1|9, 6O3M|1|QV, 7O1A|1|B8, 6ENF|1|x(0) (3) 7ZOD|1|v, 7ZP8|1|v, 7Z20|1|v

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
16NUO|1|QVModified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)X-RAY DIFFRACTION3.276
26O3M|1|QVUnmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)X-RAY DIFFRACTION3.9777
36O3M|1|XVUnmodified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)X-RAY DIFFRACTION3.9777
46NUO|1|XVModified tRNA(Pro) bound to Thermus thermophilus 70S (cognate)X-RAY DIFFRACTION3.276
57O19|1|B8Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.977
67O1C|1|B8Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.677
77O1A|1|B8Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.474
86SZS|1|xRelease factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisELECTRON MICROSCOPY3.0677
95MGP|1|xStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.177
107CPJ|1|9ycbZ-stalled 70S ribosomeELECTRON MICROSCOPY3.377
116ENF|1|xCryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.277
126ENU|1|xPolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.177
136ENJ|1|xPolyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)ELECTRON MICROSCOPY3.777
146ENJ|1|9Polyproline-stalled ribosome in the presence of A+P site tRNA and elongation-factor P (EF-P)ELECTRON MICROSCOPY3.777