Equivalence class NR_4.0_91124.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 5NEP|1|A (rep) | RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3') | Gloeobacter violaceus | Bacteria | The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with methylguanidine | X-ray diffraction | 1.6 | 2017-05-31 | ||
| 2 | 5NOM|1|A | RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3') | Gloeobacter violaceus | Bacteria | The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with guanidine | X-ray diffraction | 1.93 | 2017-05-31 | ||
| 3 | 5NEX|1|A | RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3') | Gloeobacter violaceus | Bacteria | The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with agmatine | X-ray diffraction | 1.72 | 2017-05-31 | ||
| 4 | 5NEQ|1|A | RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3') | Gloeobacter violaceus | Bacteria | The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with aminoguanidine | X-ray diffraction | 1.69 | 2017-05-31 | ||
| 5 | 5NEO|1|A | RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3') | Gloeobacter violaceus | Bacteria | The structure of the G. violaceus guanidine II riboswitch P1 stem-loop | X-ray diffraction | 1.69 | 2017-05-31 |
Release history
| Release | 2.130 |
|---|---|
| Date | 2017-06-07 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 5NEX|1|A | The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with agmatine | X-RAY DIFFRACTION | 1.72 | 17 |
| 2 | 5NOM|1|A | The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with guanidine | X-RAY DIFFRACTION | 1.93 | 17 |
| 3 | 5NEP|1|A | The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with methylguanidine | X-RAY DIFFRACTION | 1.6 | 17 |
| 4 | 5NEQ|1|A | The structure of the G. violaceus guanidine II riboswitch P1 stem-loop with aminoguanidine | X-RAY DIFFRACTION | 1.69 | 17 |
| 5 | 5NEO|1|A | The structure of the G. violaceus guanidine II riboswitch P1 stem-loop | X-RAY DIFFRACTION | 1.69 | 17 |