BGSU RNA Site //

Equivalence class NR_all_19137.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodÅDate
13PF5|1|R (rep)hexaribouracil (rU6)Crystal structure of Bs-CspB in complex with rU6X-ray diffraction1.682011-09-21

Release history

Release2.02.12.22.32.42.52.62.72.82.92.102.112.122.132.142.152.162.172.182.192.202.212.222.232.242.252.262.272.282.292.302.312.322.332.342.352.362.372.382.392.402.412.422.432.442.45
Date2014-12-052014-12-122014-12-192014-12-262015-01-022015-01-092015-01-162015-01-232015-01-302015-02-062015-02-132015-02-202015-02-272015-03-062015-03-132015-03-202015-03-272015-04-032015-04-102015-04-172015-04-242015-05-012015-05-082015-05-152015-05-222015-05-292015-06-052015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_19137.1NR_2.0_74924.12.46(1) 3PF5|1|R(0) (5) 3PEW|1|B, 3O8C|1|C, 4ALP|1|E, 3PF5|1|S, 3PEY|1|B
NR_all_19137.1NR_2.5_74924.12.46(1) 3PF5|1|R(0) (12) 2HYI|1|F, 3O8C|1|C, 3PF5|1|S, 3EX7|1|J, 3PEY|1|B, 5BTE|1|D, 3EX7|1|F, 3PEW|1|B, 5BTE|1|C, 2HYI|1|L, 3O8R|1|C, 4ALP|1|E
NR_all_19137.1NR_20.0_74924.12.46(1) 3PF5|1|R(0) (15) 1N34|1|Z, 3EX7|1|J, 3PEY|1|B, 4NL3|1|Z, 3EX7|1|F, 3PEW|1|B, 4NL3|1|R, 2HYI|1|L, 3O8R|1|C, 4ALP|1|E, 5BTE|1|D, 2HYI|1|F, 3O8C|1|C, 3PF5|1|S, 5BTE|1|C
NR_all_19137.1NR_3.0_74924.12.46(1) 3PF5|1|R(0) (12) 2HYI|1|L, 3O8R|1|C, 4ALP|1|E, 2HYI|1|F, 3O8C|1|C, 3PF5|1|S, 3EX7|1|J, 3PEY|1|B, 5BTE|1|D, 3EX7|1|F, 3PEW|1|B, 5BTE|1|C
NR_all_19137.1NR_3.5_74924.12.46(1) 3PF5|1|R(0) (14) 2HYI|1|L, 3O8R|1|C, 4ALP|1|E, 5BTE|1|D, 2HYI|1|F, 3O8C|1|C, 3PF5|1|S, 5BTE|1|C, 3EX7|1|J, 3PEY|1|B, 4NL3|1|Z, 3EX7|1|F, 3PEW|1|B, 4NL3|1|R
NR_all_19137.1NR_4.0_74924.12.46(1) 3PF5|1|R(0) (15) 3PEW|1|B, 4NL3|1|R, 3EX7|1|F, 3O8R|1|C, 4ALP|1|E, 5BTE|1|D, 2HYI|1|L, 3O8C|1|C, 3PF5|1|S, 5BTE|1|C, 2HYI|1|F, 3PEY|1|B, 4NL3|1|Z, 1N34|1|Z, 3EX7|1|J
NR_all_19137.1NR_all_74924.12.46(1) 3PF5|1|R(0) (15) 1N34|1|Z, 3EX7|1|J, 3PEY|1|B, 4NL3|1|Z, 3EX7|1|F, 3PEW|1|B, 4NL3|1|R, 2HYI|1|L, 3O8R|1|C, 4ALP|1|E, 5BTE|1|D, 2HYI|1|F, 3O8C|1|C, 3PF5|1|S, 5BTE|1|C

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13PF5|1|RCrystal structure of Bs-CspB in complex with rU6X-RAY DIFFRACTION1.689