#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17KGB|1|B (rep)5S ribosomal RNA5S rRNAMycobacterium tuberculosis H37RvBacteriaRF00001CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9Electron microscopy2.72022-01-19
27MT7|1|B5S ribosomal RNA5S rRNAMycobacterium tuberculosis H37RvBacteriaRF00001Mtb 70S with P and E site tRNAsElectron microscopy2.712022-02-02
37MT2|1|B5S ribosomal RNA5S rRNAMycobacterium tuberculosis H37RvBacteriaRF00001Mtb 70S initiation complexElectron microscopy2.762022-02-02
47MSM|1|B5S ribosomal RNA5S rRNAMycobacterium tuberculosis H37RvBacteriaRF00001Mtb 70SIC in complex with MtbEttA at Trans_R0 stateElectron microscopy2.792022-02-02
57MT3|1|B5S ribosomal RNA5S rRNAMycobacterium tuberculosis H37RvBacteriaRF00001Mtb 70S with P/E tRNAElectron microscopy2.82022-02-02
67S0S|1|i5S ribosomal RNA5S rRNAMycolicibacterium smegmatisBacteriaRF00001M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunitElectron microscopy3.052022-03-30
77MSC|1|B5S ribosomal RNA5S rRNAMycobacterium tuberculosis H37RvBacteriaRF00001Mtb 70SIC in complex with MtbEttA at Pre_R0 stateElectron microscopy2.972022-02-02
85XYM|1|B5S ribosomal RNA5S RNAMycolicibacterium smegmatisBacteriaRF00001Large subunit of Mycobacterium smegmatisElectron microscopy3.082017-09-27
97MSZ|1|B5S ribosomal RNA5S rRNAMycobacterium tuberculosis H37RvBacteriaRF00001Mtb 70SIC in complex with MtbEttA at Trans_R1 stateElectron microscopy3.12022-02-02
105O60|1|B5S ribosomal RNA5S rRNAMycolicibacterium smegmatisBacteriaRF00001Structure of the 50S large ribosomal subunit from Mycobacterium smegmatisElectron microscopy3.182017-07-12
117MSH|1|B5S ribosomal RNA5S rRNAMycobacterium tuberculosis H37RvBacteriaRF00001Mtb 70SIC in complex with MtbEttA at Pre_R1 stateElectron microscopy3.232022-02-02
127XAM|1|B5S ribosomal RNA5S rRNAMycolicibacterium smegmatis MC2 155BacteriaRF00001Mycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growthElectron microscopy3.52023-05-03
136DZP|1|B5S ribosomal RNA5S rRNAMycolicibacterium smegmatisBacteriaRF00001Cryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunitElectron microscopy3.422018-10-03
146DZI|1|B5S ribosomal RNA5S RNA (118-MER)Mycolicibacterium smegmatisBacteriaRF00001Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complexElectron microscopy3.462018-09-26
157F0D|1|B5S ribosomal RNA5S ribosomal RNAMycobacterium tuberculosis H37RaBacteriaRF00001Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycinElectron microscopy3.32022-06-29
167Y41|1|B5S ribosomal RNA5S ribosomal RNAMycolicibacterium smegmatis MC2 155BacteriaRF00001Mycobacterium smegmatis 50S ribosomal subunit from Log Phase of growthElectron microscopy4.12023-05-03

Release history

Release3.2813.282
Date2023-05-032023-05-10

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_41742.4NR_all_41742.33.281(14) 6DZP|1|B, 6DZI|1|B, 5XYM|1|B, 5O60|1|B, 7S0S|1|i, 7MT7|1|B, 7MT3|1|B, 7MT2|1|B, 7MSZ|1|B, 7MSM|1|B, 7MSH|1|B, 7MSC|1|B, 7KGB|1|B, 7F0D|1|B(2) 7XAM|1|B, 7Y41|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_41742.4NR_all_41742.53.283(16) 7MT3|1|B, 7MT2|1|B, 7MSZ|1|B, 7MSM|1|B, 7MSH|1|B, 7MSC|1|B, 7KGB|1|B, 7F0D|1|B, 6DZP|1|B, 6DZI|1|B, 5XYM|1|B, 5O60|1|B, 7Y41|1|B, 7XAM|1|B, 7S0S|1|i, 7MT7|1|B(0) (1) 8FR8|1|B

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15XYM|1|BLarge subunit of Mycobacterium smegmatisELECTRON MICROSCOPY3.08116
26DZP|1|BCryo-EM Structure of Mycobacterium smegmatis C(minus) 50S ribosomal subunitELECTRON MICROSCOPY3.42118
36DZI|1|BCryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complexELECTRON MICROSCOPY3.46118
45O60|1|BStructure of the 50S large ribosomal subunit from Mycobacterium smegmatisELECTRON MICROSCOPY3.18118
57XAM|1|BMycobacterium smegmatis 50S ribosomal subunit from Stationary phase of growthELECTRON MICROSCOPY3.5118
67Y41|1|BMycobacterium smegmatis 50S ribosomal subunit from Log Phase of growthELECTRON MICROSCOPY4.1118
77S0S|1|iM. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunitELECTRON MICROSCOPY3.05118
87MSC|1|BMtb 70SIC in complex with MtbEttA at Pre_R0 stateELECTRON MICROSCOPY2.97115
97MSH|1|BMtb 70SIC in complex with MtbEttA at Pre_R1 stateELECTRON MICROSCOPY3.23115
107MT3|1|BMtb 70S with P/E tRNAELECTRON MICROSCOPY2.8115
117MT2|1|BMtb 70S initiation complexELECTRON MICROSCOPY2.76115
127MT7|1|BMtb 70S with P and E site tRNAsELECTRON MICROSCOPY2.71115
137MSM|1|BMtb 70SIC in complex with MtbEttA at Trans_R0 stateELECTRON MICROSCOPY2.79115
147MSZ|1|BMtb 70SIC in complex with MtbEttA at Trans_R1 stateELECTRON MICROSCOPY3.1115
157KGB|1|BCryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9ELECTRON MICROSCOPY2.7115
167F0D|1|BCryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycinELECTRON MICROSCOPY3.3115
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