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Equivalence class NR_all_50286.1 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
11J8G|1|B (rep)5'-R(*UP*GP*GP*GP*GP*U)-3'X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High ResolutionX-ray diffraction0.612001-11-23
24RKV|1|BRNA (5'-R(*UP*GP*GP*GP*GP*U)-3')synthetic constructStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-ray diffraction0.882014-11-19

Release history

Release2.02.12.22.32.42.52.62.72.82.92.102.112.122.132.142.152.162.172.182.192.202.212.222.232.242.252.262.272.282.292.302.312.322.332.342.352.362.372.382.392.402.412.422.432.442.45
Date2014-12-052014-12-122014-12-192014-12-262015-01-022015-01-092015-01-162015-01-232015-01-302015-02-062015-02-132015-02-202015-02-272015-03-062015-03-132015-03-202015-03-272015-04-032015-04-102015-04-172015-04-242015-05-012015-05-082015-05-152015-05-222015-05-292015-06-052015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_50286.1NR_1.5_74981.12.46(2) 1J8G|1|B, 4RKV|1|B(0) (16) 4RNE|1|C, 4RNE|1|B, 4RNE|1|A, 4RKV|1|A, 4RJ1|1|B, 4RJ1|1|A, 1J8G|1|D, 1J8G|1|C, 1J8G|1|A, 4XK0|1|C, 4XK0|1|A, 4RNE|1|H, 4RNE|1|G, 4RNE|1|F, 4RNE|1|E, 4RNE|1|D
NR_all_50286.1NR_2.0_74981.12.46(2) 4RKV|1|B, 1J8G|1|B(0) (16) 4RNE|1|C, 4RNE|1|B, 4RNE|1|A, 4RKV|1|A, 4RJ1|1|B, 4RJ1|1|A, 1J8G|1|D, 1J8G|1|C, 1J8G|1|A, 4XK0|1|C, 4XK0|1|A, 4RNE|1|H, 4RNE|1|G, 4RNE|1|F, 4RNE|1|E, 4RNE|1|D
NR_all_50286.1NR_2.5_74981.12.46(2) 1J8G|1|B, 4RKV|1|B(0) (16) 4RNE|1|C, 4RNE|1|B, 4RNE|1|A, 4RKV|1|A, 4RJ1|1|B, 4RJ1|1|A, 1J8G|1|D, 1J8G|1|C, 1J8G|1|A, 4XK0|1|C, 4XK0|1|A, 4RNE|1|H, 4RNE|1|G, 4RNE|1|F, 4RNE|1|E, 4RNE|1|D
NR_all_50286.1NR_20.0_74981.12.46(2) 1J8G|1|B, 4RKV|1|B(0) (16) 4RNE|1|C, 4RNE|1|B, 4RNE|1|A, 4RKV|1|A, 4RJ1|1|B, 4RJ1|1|A, 1J8G|1|D, 1J8G|1|C, 1J8G|1|A, 4XK0|1|C, 4XK0|1|A, 4RNE|1|H, 4RNE|1|G, 4RNE|1|F, 4RNE|1|E, 4RNE|1|D
NR_all_50286.1NR_3.0_74981.12.46(2) 4RKV|1|B, 1J8G|1|B(0) (16) 4RNE|1|C, 4RNE|1|B, 4RNE|1|A, 4RKV|1|A, 4RJ1|1|B, 4RJ1|1|A, 1J8G|1|D, 1J8G|1|C, 1J8G|1|A, 4XK0|1|C, 4XK0|1|A, 4RNE|1|H, 4RNE|1|G, 4RNE|1|F, 4RNE|1|E, 4RNE|1|D
NR_all_50286.1NR_3.5_74981.12.46(2) 1J8G|1|B, 4RKV|1|B(0) (16) 4RNE|1|C, 4RNE|1|D, 4RNE|1|B, 4RNE|1|A, 4RKV|1|A, 4RJ1|1|B, 4RJ1|1|A, 1J8G|1|D, 1J8G|1|C, 1J8G|1|A, 4XK0|1|C, 4XK0|1|A, 4RNE|1|H, 4RNE|1|G, 4RNE|1|F, 4RNE|1|E
NR_all_50286.1NR_4.0_74981.12.46(2) 1J8G|1|B, 4RKV|1|B(0) (16) 4RNE|1|D, 4RNE|1|C, 4RNE|1|B, 4RNE|1|A, 4RKV|1|A, 4RJ1|1|B, 4RJ1|1|A, 1J8G|1|D, 1J8G|1|C, 1J8G|1|A, 4XK0|1|C, 4XK0|1|A, 4RNE|1|H, 4RNE|1|G, 4RNE|1|F, 4RNE|1|E
NR_all_50286.1NR_all_74981.12.46(2) 1J8G|1|B, 4RKV|1|B(0) (20) 4RKV|1|A, 1RAU|1|C, 4RJ1|1|B, 1RAU|1|B, 4RJ1|1|A, 1RAU|1|A, 4XK0|1|C, 1RAU|1|D, 1J8G|1|D, 4XK0|1|A, 1J8G|1|C, 4RNE|1|H, 1J8G|1|A, 4RNE|1|G, 4RNE|1|F, 4RNE|1|E, 4RNE|1|D, 4RNE|1|C, 4RNE|1|B, 4RNE|1|A

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
11J8G|1|BX-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High ResolutionX-RAY DIFFRACTION0.616
24RKV|1|BStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION0.886
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