#IFECompound(s)RNA source organismTitleMethodResolutionDate
14XNR|1|X (rep)Vibrio Vulnificus Adenine RiboswitchVibrio vulnificusVibrio Vulnificus Adenine Riboswitch Aptamer Domain, Synthesized by Position-selective Labeling of RNA (PLOR), in Complex with AdenineX-RAY DIFFRACTION2.212015-05-06
24TZY|1|XVibrio vulnificus Adenine RiboswitchVibrio vulnificusVibrio vulnificus Adenine Riboswitch Variant, grown in both Sr2+ and Mg2+X-RAY DIFFRACTION2.572014-09-10
34TZX|1|XVibrio vulnificus Adenine RiboswitchVibrio vulnificusVibrio Vulnificus Adenine Riboswitch variant, grown in Mg2+X-RAY DIFFRACTION2.012014-09-10
45UZA|1|XRNA (71-MER)Vibrio vulnificusAdenine riboswitch aptamer domain labelled with iodo-uridine by position-selective labelling of RNA (PLOR)X-RAY DIFFRACTION2.222018-02-28
55SWE|1|XVibrio vulnificus strain 93U204 chromosome II, adenine riboswitch aptamer domainVibrio vulnificusLigand-bound structure of adenine riboswitch aptamer domain converted in crystal from its ligand-free state using ligand mixing serial femtosecond crystallographyX-RAY DIFFRACTION32016-11-23

Release history

Release3.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.81
Date2018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-152019-02-222019-03-012019-03-082019-03-152019-03-222019-03-292019-04-052019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-05

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_59689.4NR_all_59689.33.11(4) 5SWE|1|X, 4XNR|1|X, 4TZY|1|X, 4TZX|1|X(1) 5UZA|1|X(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
15SWE|1|XLigand-bound structure of adenine riboswitch aptamer domain converted in crystal from its ligand-free state using ligand mixing serial femtosecond crystallographyX-RAY DIFFRACTION371
24TZX|1|XVibrio Vulnificus Adenine Riboswitch variant, grown in Mg2+X-RAY DIFFRACTION2.0171
34TZY|1|XVibrio vulnificus Adenine Riboswitch Variant, grown in both Sr2+ and Mg2+X-RAY DIFFRACTION2.5771
44XNR|1|XVibrio Vulnificus Adenine Riboswitch Aptamer Domain, Synthesized by Position-selective Labeling of RNA (PLOR), in Complex with AdenineX-RAY DIFFRACTION2.2171
55UZA|1|XAdenine riboswitch aptamer domain labelled with iodo-uridine by position-selective labelling of RNA (PLOR)X-RAY DIFFRACTION2.2269