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Equivalence class NR_all_80570.2 Obsolete

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14EJT|1|G (rep)5'-R(*AP*A)-3'Staphylococcus epidermidis TcaR in complex with RNAX-ray diffraction32013-06-05
23J0L|1|wmRNA fragmentOryctolagus cuniculusCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9.8A cryo-EM map: classic PRE state 1Electron microscopy9.82011-11-16
33J0O|1|wmRNA fragmentOryctolagus cuniculusCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9A cryo-EM map: classic PRE state 2Electron microscopy92011-11-16
43J0Q|1|wmRNA fragmentOryctolagus cuniculusCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 2Electron microscopy10.62011-11-16
53J0P|1|wmRNA fragmentOryctolagus cuniculusCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 1Electron microscopy10.62011-11-16

Release history

Release2.12.22.32.42.52.62.72.82.92.102.112.122.132.142.152.162.172.182.192.202.212.222.232.242.252.262.272.282.292.302.312.322.332.342.352.362.372.382.392.402.412.422.432.442.452.462.472.482.492.502.512.522.532.54
Date2014-12-122014-12-192014-12-262015-01-022015-01-092015-01-162015-01-232015-01-302015-02-062015-02-132015-02-202015-02-272015-03-062015-03-132015-03-202015-03-272015-04-032015-04-102015-04-172015-04-242015-05-012015-05-082015-05-152015-05-222015-05-292015-06-052015-06-122015-06-192015-06-262015-07-032015-07-102015-07-172015-07-242015-07-312015-08-072015-08-142015-08-212015-08-282015-09-042015-09-112015-09-182015-09-252015-10-022015-10-092015-10-162015-10-232015-10-302015-11-062015-11-132015-11-202015-11-272015-12-042015-12-112015-12-18

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_all_80570.2NR_all_71291.12.1(1) 4EJT|1|G(4) 3J0Q|1|w, 3J0P|1|w, 3J0O|1|w, 3J0L|1|w(0)
NR_all_80570.2NR_all_80570.12.1(4) 3J0Q|1|w, 3J0P|1|w, 3J0O|1|w, 3J0L|1|w(1) 4EJT|1|G(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_all_80570.2NR_20.0_80570.32.55(5) 3J0L|1|w, 3J0P|1|w, 4EJT|1|G, 3J0O|1|w, 3J0Q|1|w(0) (2) 5CEU|1|C, 5CEU|1|D
NR_all_80570.2NR_3.0_80570.32.55(1) 4EJT|1|G(4) 3J0P|1|w, 3J0O|1|w, 3J0L|1|w, 3J0Q|1|w(2) 5CEU|1|C, 5CEU|1|D
NR_all_80570.2NR_3.5_80570.32.55(1) 4EJT|1|G(4) 3J0P|1|w, 3J0O|1|w, 3J0L|1|w, 3J0Q|1|w(2) 5CEU|1|C, 5CEU|1|D
NR_all_80570.2NR_4.0_80570.32.55(1) 4EJT|1|G(4) 3J0P|1|w, 3J0O|1|w, 3J0L|1|w, 3J0Q|1|w(2) 5CEU|1|D, 5CEU|1|C
NR_all_80570.2NR_all_80570.32.55(5) 3J0O|1|w, 3J0Q|1|w, 3J0L|1|w, 3J0P|1|w, 4EJT|1|G(0) (2) 5CEU|1|C, 5CEU|1|D

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5

#S - ordering by similarity (same as in the heat map).
#SPDBTitleMethodResolutionLength
13J0O|1|wCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9A cryo-EM map: classic PRE state 2ELECTRON MICROSCOPY92
23J0P|1|wCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 1ELECTRON MICROSCOPY10.62
33J0L|1|wCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 9.8A cryo-EM map: classic PRE state 1ELECTRON MICROSCOPY9.82
43J0Q|1|wCore of mammalian 80S pre-ribosome in complex with tRNAs fitted to a 10.6A cryo-em map: rotated PRE state 2ELECTRON MICROSCOPY10.62
54EJT|1|GStaphylococcus epidermidis TcaR in complex with RNAX-RAY DIFFRACTION32
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