Equivalence class NR_all_87525.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7QIZ|1|S2 (rep) | Small subunit ribosomal RNA | 18S | Solanum lycopersicum | Eukarya | RF01960 | Specific features and methylation sites of a plant 80S ribosome | Electron microscopy | 2.38 | 2022-08-03 |
| 2 | 7QIX|1|2 | Small subunit ribosomal RNA | 18S rRNA body | Solanum lycopersicum | Eukarya | RF01960 | Specific features and methylation sites of a plant ribosome. 40S body ribosomal subunit. | Electron microscopy | 2.53 | 2022-06-15 |
| 3 | 4V7E|1|Ad | Small subunit ribosomal RNA | 18S ribosomal RNA | Triticum aestivum | Eukarya | RF01960 | Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome | Electron microscopy | 5.5 | 2014-07-09 |
Release history
| Release | 3.242 | 3.243 | 3.244 | 3.245 | 3.246 | 3.247 | 3.248 | 3.249 | 3.250 | 3.251 | 3.252 | 3.253 | 3.254 | 3.255 | 3.256 | 3.257 | 3.258 | 3.259 | 3.260 | 3.261 | 3.262 | 3.263 | 3.264 | 3.265 | 3.266 | 3.267 | 3.268 | 3.269 | 3.270 | 3.271 | 3.272 | 3.273 | 3.274 | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 | 3.280 | 3.281 | 3.282 | 3.283 | 3.284 | 3.285 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-08-03 | 2022-08-10 | 2022-08-17 | 2022-08-24 | 2022-08-31 | 2022-09-07 | 2022-09-14 | 2022-09-21 | 2022-09-28 | 2022-10-05 | 2022-10-12 | 2022-10-19 | 2022-10-26 | 2022-11-02 | 2022-11-09 | 2022-11-16 | 2022-11-23 | 2022-11-30 | 2022-12-07 | 2022-12-14 | 2022-12-21 | 2022-12-28 | 2023-01-04 | 2023-01-11 | 2023-01-18 | 2023-01-25 | 2023-02-01 | 2023-02-08 | 2023-02-15 | 2023-02-22 | 2023-03-01 | 2023-03-08 | 2023-03-15 | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 | 2023-05-03 | 2023-05-10 | 2023-05-17 | 2023-05-24 | 2023-05-31 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_87525.2 | NR_all_87525.1 | 3.242 | (2) 4V7E|1|Ad, 7QIX|1|2 | (1) 7QIZ|1|S2 | (0) |
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well.
| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7QIX|1|2 | Specific features and methylation sites of a plant ribosome. 40S body ribosomal subunit. | ELECTRON MICROSCOPY | 2.53 | 1060 |
| 2 | 7QIZ|1|S2 | Specific features and methylation sites of a plant 80S ribosome | ELECTRON MICROSCOPY | 2.38 | 1507 |
| 3 | 4V7E|1|Ad | Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosome | ELECTRON MICROSCOPY | 5.5 | 1762 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: