Equivalence class NR_all_96091.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 7CPU|1|L5+ 7CPU|1|L8 (rep) | Large subunit ribosomal RNA + 5.8S ribosomal RNA | Mus musculus 28S ribosomal RNA, Mus musculus 5.8S ribosomal RNA | Mus musculus | Eukarya | RF02543 + RF00002 | Cryo-EM structure of 80S ribosome from mouse kidney | Electron microscopy | 2.82 | 2022-02-02 |
| 2 | 7CPV|1|L5+ 7CPV|1|L8 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | Mus musculus 28S ribosomal RNA, Mus musculus 5.8S ribosomal RNA | Mus musculus | Eukarya | RF02543 + RF00002 | Cryo-EM structure of 80S ribosome from mouse testis | Electron microscopy | 3.03 | 2022-02-02 |
| 3 | 7LS2|1|A2+ 7LS2|1|C2 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S rRNA, 5.8S rRNA | Mus musculus | Eukarya | RF02543 + RF00002 | 80S ribosome from mouse bound to eEF2 (Class I) | Electron microscopy | 3.1 | 2021-11-03 |
| 4 | 6SWA|1|q+ 6SWA|1|r | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S ribosomal RNA (3612-MER), 5.8S ribosomal RNA (157-MER) | Mus musculus | Eukarya | RF02543 + RF00002 | Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1 | Electron microscopy | 3.1 | 2020-09-30 |
| 5 | 7LS1|1|A2+ 7LS1|1|C2 | Large subunit ribosomal RNA + 5.8S ribosomal RNA | 28S rRNA, 5.8S rRNA | Mus musculus | Eukarya | RF02543 + RF00002 | 80S ribosome from mouse bound to eEF2 (Class II) | Electron microscopy | 3.3 | 2021-11-03 |
Release history
| Release | 3.216 | 3.217 | 3.218 | 3.219 | 3.220 | 3.221 | 3.222 | 3.223 | 3.224 | 3.225 | 3.226 | 3.227 | 3.228 | 3.229 | 3.230 | 3.231 | 3.232 | 3.233 | 3.234 | 3.235 | 3.236 | 3.237 | 3.238 | 3.239 | 3.240 | 3.241 | 3.242 | 3.243 | 3.244 | 3.245 | 3.246 | 3.247 | 3.248 | 3.249 | 3.250 | 3.251 | 3.252 | 3.253 | 3.254 | 3.255 | 3.256 | 3.257 | 3.258 | 3.259 | 3.260 | 3.261 | 3.262 | 3.263 | 3.264 | 3.265 | 3.266 | 3.267 | 3.268 | 3.269 | 3.270 | 3.271 | 3.272 | 3.273 | 3.274 | 3.275 | 3.276 | 3.277 | 3.278 | 3.279 | 3.280 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2022-02-02 | 2022-02-09 | 2022-02-16 | 2022-02-23 | 2022-03-02 | 2022-03-09 | 2022-03-16 | 2022-03-23 | 2022-03-30 | 2022-04-06 | 2022-04-13 | 2022-04-20 | 2022-04-27 | 2022-05-04 | 2022-05-11 | 2022-05-18 | 2022-05-25 | 2022-06-01 | 2022-06-08 | 2022-06-15 | 2022-06-22 | 2022-06-29 | 2022-07-06 | 2022-07-13 | 2022-07-20 | 2022-07-27 | 2022-08-03 | 2022-08-10 | 2022-08-17 | 2022-08-24 | 2022-08-31 | 2022-09-07 | 2022-09-14 | 2022-09-21 | 2022-09-28 | 2022-10-05 | 2022-10-12 | 2022-10-19 | 2022-10-26 | 2022-11-02 | 2022-11-09 | 2022-11-16 | 2022-11-23 | 2022-11-30 | 2022-12-07 | 2022-12-14 | 2022-12-21 | 2022-12-28 | 2023-01-04 | 2023-01-11 | 2023-01-18 | 2023-01-25 | 2023-02-01 | 2023-02-08 | 2023-02-15 | 2023-02-22 | 2023-03-01 | 2023-03-08 | 2023-03-15 | 2023-03-22 | 2023-03-29 | 2023-04-05 | 2023-04-12 | 2023-04-19 | 2023-04-26 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|---|---|---|---|---|
| NR_all_96091.1 | NR_all_88402.1 | 3.216 | (3) 7LS2|1|A2+7LS2|1|C2, 7LS1|1|A2+7LS1|1|C2, 6SWA|1|q+6SWA|1|r | (2) 7CPV|1|L5+7CPV|1|L8, 7CPU|1|L5+7CPU|1|L8 | (0) |
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. Instances are ordered to put similar structures near each other. The colorbar ranges from 0 to the maximum observed discrepancy, up to 0.5
#S - ordering by similarity (same as in the heat map).| #S | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|
| 1 | 7CPV|1|L5+7CPV|1|L8 | Cryo-EM structure of 80S ribosome from mouse testis | ELECTRON MICROSCOPY | 3.03 | 3541 |
| 2 | 7CPU|1|L5+7CPU|1|L8 | Cryo-EM structure of 80S ribosome from mouse kidney | ELECTRON MICROSCOPY | 2.82 | 3539 |
| 3 | 7LS1|1|A2+7LS1|1|C2 | 80S ribosome from mouse bound to eEF2 (Class II) | ELECTRON MICROSCOPY | 3.3 | 3626 |
| 4 | 7LS2|1|A2+7LS2|1|C2 | 80S ribosome from mouse bound to eEF2 (Class I) | ELECTRON MICROSCOPY | 3.1 | 3625 |
| 5 | 6SWA|1|q+6SWA|1|r | Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1 | ELECTRON MICROSCOPY | 3.1 | 3612 |