4X4N Internal, Hairpin and 3-way Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4X4N_001 | 1/B/12:20 | T-loop with 2 stacked bulged bases Not in a motif group | geometric HL_5WT1_003 HL_71309.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4X4N_002 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4X4N_003 | 1/G/1:4, 1/G/28:31 | No text annotation Not in a motif group | geometric IL_2O3V_003 IL_04655.1 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4X4N_001 | Tandem non-canonical cWW pairs | ||
| IL_4X4N_002 | Tandem non-canonical cWW pairs |
Valid loops
No loops found
Problematic loops
No problematic loops
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