4X4N Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_4X4N_001 | 1/B/12:20 | T-loop with 2 stacked bulged bases | geometric HL_5WT1_003 HL_28252.9 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_4X4N_002 | T-loop related |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_4X4N_004 | 1/B/2:4, 1/B/28:30 | Isolated non-canonical cWW pair | geometric IL_4X4N_005 IL_87907.2 | |
| IL_4X4N_005 | 1/D/2:4, 1/D/28:30 | Isolated non-canonical cWW pair IL_87907.2 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_4X4N_001 | Tandem non-canonical cWW pairs | ||
| IL_4X4N_002 | Tandem non-canonical cWW pairs | ||
| IL_4X4N_003 | No text annotation |
Valid loops
No loops found
Problematic loops
No problematic loops
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