5Z3G Summary
- Structure Title
- 5Z3G Summary
- Authors
- Release Date
- 2018-04-11
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
- Chains
-
- 3 RNA chains from Saccharomyces cerevisiae
- 32 other chains
- Compounds
- 25S rRNA, 5.8S rRNA, ITS2 RNA, Ribosome biogenesis protein RLP7, Ribosome biogenesis protein 15, 60S ribosomal protein L3, 60S ribosomal protein L4-A, Proteasome-interacting protein CIC1, 60S ribosomal protein L6-A, 60S ribosomal protein L7-A, 60S ribosomal protein L8-A, 60S ribosomal protein L9-A, Nucleolar protein 7, Eukaryotic translation initiation factor 6, Ribosome production factor 1, 60S ribosomal protein L13-A, 60S ribosomal protein L14-A, 60S ribosomal protein L15-A, 60S ribosomal protein L16-A, 60S ribosomal protein L17-A, 60S ribosomal protein L18-A, Ribosome biogenesis protein NSA1, 60S ribosomal protein L20-A, Ribosomal RNA-processing protein 1, ATP-dependent RNA helicase HAS1, Protein MAK16, Ribosome biogenesis protein BRX1, rRNA-processing protein EBP2, 60S ribosomal protein L26-A, Unassigned, 60S ribosomal protein L32, 60S ribosomal protein L33-A, 60S ribosomal protein L35-A, 60S ribosomal protein L36-A, 60S ribosomal protein L37-A
Pairwise Interactions
Interactions annotated by FR3D:- 576 base-pairs
- 1,561 base-stacking
- 618 base-phosphate
- 79 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 5Z3G contains:- 64 internal loops from 0 motif groups
- 37 hairpin loops from 0 motif groups
- 4 three-way junctions
3D Redundancy
5Z3G has chains which belong to the following equivalence classes in the current representative set:- NR_20.0_90506.61 (1)
- NR_20.0_18489.9 (1)
- NR_4.0_90506.61 (1)
- NR_4.0_18489.9 (1)
- NR_all_90506.61 (1)
- NR_all_18489.9 (1)
Similar structures
5TBW 6N8K 6N8L 7Z34 7R7A 6R84 6SV4 6SV4 6SV4 7OH3 4U53 7NAC 5APO 8BJQ 6GQB 5MC6 7NRC 6N8N 8BQD 4U56 4U56 6OIG 6N8J 6QTZ 8BQX 6N8O 6N8M 6R87 4U50 4U55 4U51 4U51 6S47 4U4Y 4U55 4U3N 3JCT 5H4P 6M62 4U50 4U53 6QT0 6HD7 5JUP 7OF1 7ZPQ 6RI5 6R86 6Z6J 6Z6K 4U4Y 5JUU 5JCS 6EM4 6C0F 6I7O 6I7O 7OHR 7OHP 7OHW 7OHY 7OHU 6EM3 7OHS 3J6Y 3J6X 4V6I 4V7F 4V8T 4V8Z 6CB1 8E5T 7OHT 3J78 3J77 6EM5 6EM1 5APN 6XIQ 6ELZ 5JUS 6FT6 6GQV 6S05 6T83 5JUO 5JUT 5T6R 6YLY 7ZUW 7OHV 7OHX 7ZRS 5GAK 6YLX 6GQ1 4V8Y 7NRD 4U4O 4U4O 6T83 4U3N 7UOO 5DGF 5TGA 5DGF 5TGA 5DGE 5DGV 5DAT 5DGV 5DAT 4V7R 5DGE 5DC3 5DC3 8AGW 8AGV 8AGT 8AGZ 8HFR 7ZUX 8AAF 7TOP 8AGX 7ZW0 4V7R 5TGM 5OBM 6HHQ 6HHQ 5MEI 5MEI 5I4L 5I4L 7OSA 4V88 4V88 5OBM 5LYB 5NDV 5TGM 5NDG 5NDG 5NDW 5NDW 5NDV 7OSM 5ON6 5LYB 5ON6 5TBW 7V08 7BTB 6T7T 4U6F 6YLH 7OHQ 6Q8Y 7U0H 7RR5 4U52 4U52 4U4U 4U6F 6QIK 7B7D 7BT6 6T7I 6RZZ 4U4Z 4U4N 4U4Z 6TNU 4U4N 5M1J 6XIR 4U4Q 4U4U 4U4R 7AZY 6SNT 6TB3 6WOO 7MPJ 7TOO 7UQZ 6T4Q 7UQB 4U4R 8BIP 7UG6 4U3M 4U4Q 6YLG 4U3M 5T62 7ZS5 7MPI 7N8B 4U3U 4U3U 8AGUStructures from NR_all_90506.61