5NRG Summary
- Structure title
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with RB02
- Authors
- Release date
- 2017-08-09
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
- Chains
- 2 RNA chains from Staphylococcus aureus
- 24 other chains
- Nucleic acid compounds
- Other compounds
- 23S ribosomal RNA, 5S ribosomal RNA
- 50S ribosomal protein L34, 50S ribosomal protein L35, 50S ribosomal protein L2, 50S ribosomal protein L3, 50S ribosomal protein L4, 50S ribosomal protein L5, 50S ribosomal protein L6, 50S ribosomal protein L13, 50S ribosomal protein L14, 50S ribosomal protein L15, 50S ribosomal protein L16, 50S ribosomal protein L17, 50S ribosomal protein L18, 50S ribosomal protein L19, 50S ribosomal protein L20, 50S ribosomal protein L21, 50S ribosomal protein L22, 50S ribosomal protein L23, 50S ribosomal protein L24, 50S ribosomal protein L25, 50S ribosomal protein L27, 50S ribosomal protein L29, 50S ribosomal protein L30, 50S ribosomal protein L32
Pairwise Interactions
Interactions annotated by FR3D:- 958 base-pairs
- 2,684 base-stacking
- 329 base-phosphate
- 317 base-ribose
- 138 oxygen stacking
- 152 sugar-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 5nrg contains:- 73 hairpin loops from 0 motif groups
- 109 internal loops from 0 motif groups
- 38 junction loops from 0 motif groups
3D Redundancy
5nrg has chains which belong to the following equivalence classes in the current representative set:- NR_all_90633.28 (1)
- NR_all_83891.27 (1)
- NR_4.0_90633.28 (1)
- NR_4.0_83891.27 (1)
- NR_3.5_90633.28 (1)
- NR_3.5_83891.27 (1)
- NR_20.0_90633.28 (1)
- NR_20.0_83891.27 (1)