6D90 Summary
- Structure Title
- 6D90 Summary
- Authors
- Release Date
- 2018-06-06
- Experimental technique
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
- Chains
-
- 6 RNA chains from Oryctolagus cuniculus, Escherichia coli, Cricket paralysis virus
- 79 other chains
- Compounds
- 18S rRNA, P-tRNA, CrPV-IRES, 28S rRNA, 5S rRNA, 5.8S rRNA, uL2, uL3, uS2, uL4, eS1, uL18, uS5, eL6, uS3, uL30, eS4, eL8, uS7, uL6, eS6, uL16, eS7, uL11, eS8, uL1, uS4, eL13, eS10, eL14, uS17, eL15, eS12, uL13, uS15, uL22, uS11, rL18, uS19, eL19, uS9, eL20, eS17, eL21, uS13, eL22, eS19, uL14, uS10, eL24, eS21, eL23, uS8, uL24, uS12, eL27, eS24, uL15, eS25, eL29, eS26, eL30, eS27, eL31, eS28, eL32, eS29, eL33, eS30, eL34, eS31, eL35, RACK1, eL36, eL37, eRF1, eL38, eL39, eL40, eL41, eL42, eL43, eL28, uL10, uL11
Pairwise Interactions
Interactions annotated by FR3D:- 1,924 base-pairs
- 5,299 base-stacking
- 2,115 base-phosphate
- 225 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 6D90 contains:- 260 internal loops from 0 motif groups
- 121 hairpin loops from 0 motif groups
- 28 three-way junctions
3D Redundancy
6D90 has chains which belong to the following equivalence classes in the current representative set:- NR_20.0_06650.25 (1)
- NR_20.0_21280.24 (1)
- NR_20.0_73216.5 (1)
- NR_20.0_84648.1 (1) rep
- NR_20.0_10255.25 (1)
- NR_3.5_06650.25 (1)
- NR_3.5_21280.24 (1)
- NR_3.5_73216.5 (1)
- NR_3.5_84648.1 (1) rep
- NR_3.5_10255.25 (1)
- NR_4.0_06650.25 (1)
- NR_4.0_21280.24 (1)
- NR_4.0_73216.5 (1)
- NR_4.0_84648.1 (1) rep
- NR_4.0_10255.25 (1)
- NR_all_06650.25 (1)
- NR_all_21280.24 (1)
- NR_all_73216.5 (1)
- NR_all_84648.1 (1) rep
- NR_all_10255.25 (1)
Similar structures
4KZY 5LZU 6HCF 7SYV 6R7Q 3JAH 5LZY 7SYN 7SYP 7NWH 6R6G 7SYQ 6GZ3 7SYX 7SYW 7NWG 6GZ4 5LZT 6YAM 6MTB 6HCJ 5FLX 3JAG 3JAI 6HCQ 6HCM 4UJE 3JAN 3JAJ 4UJD 4D61 4D5L 5K0Y 7SYJ 7SYM 7SYG 7SYK 7SYT 7SYI 7SYL 7SYU 7SYH 7SYO 4UJC 4KZZ 6R5Q 7TOQ 7O81 6ZVK 6P5I 6P5K 6P5J 7UCJ 6YAL 7NWI 7O80 4KZX 7O7Y 7OYD 7O7Z 7JQB 7UCK 6SGC 7TOR 6P4G 7MDZ 6R6P 6YAN 6MTC 6MTE 6W2S 6GZ5 7SYR 5LZZ 5LZW 7SYS 5LZV 6P4H 6P5N 6D9J 7JQC 5LZS 6W2T 7A01 6MTD 5LZXStructures from NR_all_21280.24