View in PDB or NAKB
Structure Title
7D5T Summary
Authors
Du, Y., Zhang, J., An, W., Ye, K.
Release Date
2021-10-06
Experimental technique
ELECTRON MICROSCOPY
Resolution
6.0 Å
Chains
  • 3 RNA chains from Saccharomyces cerevisiae S288C
  • 52 other chains
Compounds
U3 snoRNA, rRNA 2'-O-methyltransferase fibrillarin, rRNA 2'-O-methyltransferase fibrillarin, Nucleolar protein 56, Nucleolar protein 58, Ribosomal RNA-processing protein 9, 13 kDa ribonucleoprotein-associated protein, 13 kDa ribonucleoprotein-associated protein, 5' ETS, U3 small nucleolar RNA-associated protein 7, U3 small nucleolar RNA-associated protein 11, U3 small nucleolar RNA-associated protein MPP10, U3 small nucleolar ribonucleoprotein protein IMP3, U3 small nucleolar ribonucleoprotein protein IMP4, Something about silencing protein 10, Protein SOF1, rRNA-processing protein FCF2, rRNA-processing protein FCF1, U3 small nucleolar RNA-associated protein 5, U3 small nucleolar RNA-associated protein 10, NET1-associated nuclear protein 1, Periodic tryptophan protein 2, U3 small nucleolar RNA-associated protein 12, U3 small nucleolar RNA-associated protein 13, U3 small nucleolar RNA-associated protein 6, U3 small nucleolar RNA-associated protein 18, U3 small nucleolar RNA-associated protein 21, rRNA biogenesis protein RRP5, U3 small nucleolar RNA-associated protein 22, Ribosomal RNA-processing protein 7, Ribosome biogenesis protein BMS1, RNA 3'-terminal phosphate cyclase-like protein, Nucleolar complex protein 14, U3 small nucleolar RNA-associated protein 20, U3 small nucleolar RNA-associated protein 14, Pno1, Probable ATP-dependent RNA helicase DHR1, 18S rRNA, 40S ribosomal protein S1-A, 40S ribosomal protein S4-A, 40S ribosomal protein S5, 40S ribosomal protein S6-A, 40S ribosomal protein S7-A, 40S ribosomal protein S8-A, 40S ribosomal protein S9-A, 40S ribosomal protein S11-A, 40S ribosomal protein S13, 40S ribosomal protein S14-A, 40S ribosomal protein S16-A, 40S ribosomal protein S22-B, 40S ribosomal protein S23-A, 40S ribosomal protein S24-A, 40S ribosomal protein S27-A, 40S ribosomal protein S28-A, Unassigned peptides 1

Pairwise Interactions

Interactions annotated by FR3D: View all

RNA 3D Motifs

In the current release of the RNA 3D Motif Atlas, 7D5T contains:
  • 59 internal loops from 0 motif groups
  • 26 hairpin loops from 0 motif groups
  • 7 three-way junctions
More

3D Redundancy

7D5T has chains which belong to the following equivalence classes in the current representative set:

Similar structures

None found
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