HL_10PX_009
3D structure
- PDB id
- 10PX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with benzoxaborole derivative of azithromycin (AZI-BB2), mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.45 Å
Loop
- Sequence
- UUGGGAAG
- Length
- 8 nucleotides
- Bulged bases
- 10PX|1|1A|A|311
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_10PX_009 not in the Motif Atlas
- Homologous match to HL_7A0S_010
- Geometric discrepancy: 0.1947
- The information below is about HL_7A0S_010
- Detailed Annotation
- T-loop with 1 bulged base
- Broad Annotation
- T-loop
- Motif group
- HL_13999.4
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 24
Unit IDs
10PX|1|1A|U|305
10PX|1|1A|U|306
10PX|1|1A|G|307
10PX|1|1A|G|308
10PX|1|1A|G|309
10PX|1|1A|A|310
10PX|1|1A|A|311
10PX|1|1A|G|312
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1Y
- 50S ribosomal protein L24
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