HL_10PX_013
3D structure
- PDB id
- 10PX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with benzoxaborole derivative of azithromycin (AZI-BB2), mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.45 Å
Loop
- Sequence
- GGACCACC
- Length
- 8 nucleotides
- Bulged bases
- 10PX|1|1A|G|411
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_10PX_013 not in the Motif Atlas
- Homologous match to HL_7A0S_014
- Geometric discrepancy: 0.1599
- The information below is about HL_7A0S_014
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_30680.5
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
10PX|1|1A|G|410
10PX|1|1A|G|411
10PX|1|1A|A|412
10PX|1|1A|C|413
10PX|1|1A|C|414
10PX|1|1A|A|415
10PX|1|1A|C|416
10PX|1|1A|C|417
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 11
- 50S ribosomal protein L28
- Chain 1P
- 50S ribosomal protein L15
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