HL_10PX_188
3D structure
- PDB id
- 10PX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with benzoxaborole derivative of azithromycin (AZI-BB2), mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.45 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 10PX|1|2a|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_10PX_188 not in the Motif Atlas
- Homologous match to HL_6CZR_088
- Geometric discrepancy: 0.1817
- The information below is about HL_6CZR_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
10PX|1|2a|G|786
10PX|1|2a|A|787
10PX|1|2a|U|788
10PX|1|2a|U|789
10PX|1|2a|A|790
10PX|1|2a|G|791
10PX|1|2a|A|792
10PX|1|2a|U|793
10PX|1|2a|A|794
10PX|1|2a|C|795
10PX|1|2a|C|796
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2A
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2k
- 30S ribosomal protein S11
- Chain 2v
- MET-PHE-mRNA
- Chain 2x
- Transfer RNA; tRNA
- Chain 2y
- Transfer RNA; tRNA
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