HL_10QM_005

3D structure

PDB id

10QM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli 50S ribosomal subunit bound to compound 48a

Experimental method

ELECTRON MICROSCOPY

Resolution

2.49 Å

Loop

Sequence

UGAAUCCAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

10QM|1|I|U|158
10QM|1|I|G|159
10QM|1|I|A|160
10QM|1|I|A|161
10QM|1|I|U|162
10QM|1|I|C|163
10QM|1|I|C|164
10QM|1|I|A|165
10QM|1|I|U|166
10QM|1|I|A|167
10QM|1|I|G|168

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain f

50S ribosomal protein L28