HL_8B0X_037

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

UGAAUCCAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50765.2

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8B0X|1|a|U|158
8B0X|1|a|G|159
8B0X|1|a|A|160
8B0X|1|a|A|161
8B0X|1|a|U|162
8B0X|1|a|C|163
8B0X|1|a|C|164
8B0X|1|a|A|165
8B0X|1|a|U|166
8B0X|1|a|A|167
8B0X|1|a|G|168

Current chains

Chain a

23S rRNA

Nearby chains

Chain w

50S ribosomal protein L28