HL_10QM_031
3D structure
- PDB id
- 10QM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli 50S ribosomal subunit bound to compound 48a
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- GUGAAAAGC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_10QM_031 not in the Motif Atlas
- Homologous match to HL_7A0S_032
- Geometric discrepancy: 0.1652
- The information below is about HL_7A0S_032
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.6
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 139
Unit IDs
10QM|1|I|G|1281
10QM|1|I|U|1282
10QM|1|I|G|1283
10QM|1|I|A|1284
10QM|1|I|A|1285
10QM|1|I|A|1286
10QM|1|I|A|1287
10QM|1|I|G|1288
10QM|1|I|C|1289
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain V
- Large ribosomal subunit protein bL17
- Chain a
- 50S ribosomal protein L22
- Chain i
- 50S ribosomal protein L32
Coloring options: