HL_10QM_039
3D structure
- PDB id
- 10QM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli 50S ribosomal subunit bound to compound 48a
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- CGACAC(6MZ)G
- Length
- 8 nucleotides
- Bulged bases
- 10QM|1|I|A|1614, 10QM|1|I|A|1616, 10QM|1|I|6MZ|1618
- QA status
- Modified nucleotides: 6MZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_10QM_039 not in the Motif Atlas
- Homologous match to HL_7A0S_040
- Geometric discrepancy: 0.0891
- The information below is about HL_7A0S_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_28592.4
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
10QM|1|I|C|1612
10QM|1|I|G|1613
10QM|1|I|A|1614
10QM|1|I|C|1615
10QM|1|I|A|1616
10QM|1|I|C|1617
10QM|1|I|6MZ|1618
10QM|1|I|G|1619
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain a
- 50S ribosomal protein L22
- Chain k
- 50S ribosomal protein L34
Coloring options: