HL_10QM_060
3D structure
- PDB id
- 10QM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli 50S ribosomal subunit bound to compound 48a
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.49 Å
Loop
- Sequence
- UGAAGUAG
- Length
- 8 nucleotides
- Bulged bases
- 10QM|1|I|G|2529
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_10QM_060 not in the Motif Atlas
- Homologous match to HL_7A0S_060
- Geometric discrepancy: 0.1476
- The information below is about HL_7A0S_060
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_02262.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 36
Unit IDs
10QM|1|I|U|2528
10QM|1|I|G|2529
10QM|1|I|A|2530
10QM|1|I|A|2531
10QM|1|I|G|2532
10QM|1|I|U|2533
10QM|1|I|A|2534
10QM|1|I|G|2535
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain O
- Large ribosomal subunit protein uL6
- Chain m
- 50S ribosomal protein L36
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