HL_11BQ_034
3D structure
- PDB id
- 11BQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli 70S ribosome containing an evolved 16S rRNA (EC-S3.5)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UGAAUCCAUAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11BQ_034 not in the Motif Atlas
- Homologous match to HL_8B0X_037
- Geometric discrepancy: 0.0853
- The information below is about HL_8B0X_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50765.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
11BQ|1|a|U|158
11BQ|1|a|G|159
11BQ|1|a|A|160
11BQ|1|a|A|161
11BQ|1|a|U|162
11BQ|1|a|C|163
11BQ|1|a|C|164
11BQ|1|a|A|165
11BQ|1|a|U|166
11BQ|1|a|A|167
11BQ|1|a|G|168
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain w
- 50S ribosomal protein L28
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