HL_11BQ_035
3D structure
- PDB id
- 11BQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli 70S ribosome containing an evolved 16S rRNA (EC-S3.5)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAAACAUC
- Length
- 8 nucleotides
- Bulged bases
- 11BQ|1|a|A|196, 11BQ|1|a|A|199
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11BQ_035 not in the Motif Atlas
- Homologous match to HL_7A0S_006
- Geometric discrepancy: 0.0972
- The information below is about HL_7A0S_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48677.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 24
Unit IDs
11BQ|1|a|G|194
11BQ|1|a|A|195
11BQ|1|a|A|196
11BQ|1|a|A|197
11BQ|1|a|C|198
11BQ|1|a|A|199
11BQ|1|a|U|200
11BQ|1|a|C|201
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 5
- E-site tRNA
- Chain k
- Large ribosomal subunit protein uL15
- Chain w
- 50S ribosomal protein L28
Coloring options: