HL_7A0S_006

3D structure

PDB id

7A0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S Deinococcus radiodurans ribosome bounded with mycinamicin I

Experimental method

X-RAY DIFFRACTION

Resolution

3.22 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases (A, C, G, U)

173A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.3

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

7A0S|1|X|G|171
7A0S|1|X|A|172
7A0S|1|X|A|173
7A0S|1|X|A|174
7A0S|1|X|C|175
7A0S|1|X|A|176
7A0S|1|X|U|177
7A0S|1|X|C|178

Current chains

Chain X

RNA (2732-MER)

Nearby chains

Chain 3

50S ribosomal protein L35

Chain I

50S ribosomal protein L15

Chain U

50S ribosomal protein L28