HL_11EL_002

3D structure

PDB id

11EL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Vibrio cholerae (VC-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AACUUGUU

Length

8 nucleotides

Bulged bases

11EL|1|A|A|82, 11EL|1|A|U|84, 11EL|1|A|U|85

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_11EL_002 not in the Motif Atlas

Geometric match to HL_9H3G_024

Geometric discrepancy: 0.3776

The information below is about HL_9H3G_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_44506.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

11EL|1|A|A|81
11EL|1|A|A|82
11EL|1|A|C|83
11EL|1|A|U|84
11EL|1|A|U|85
11EL|1|A|G|86
11EL|1|A|U|87
11EL|1|A|U|88

Current chains

Chain A

16S ribosomal RNA

Nearby chains