HL_11FV_017
3D structure
- PDB id
- 11FV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11FV_017 not in the Motif Atlas
- Homologous match to HL_6CZR_088
- Geometric discrepancy: 0.3706
- The information below is about HL_6CZR_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
11FV|1|C|G|780
11FV|1|C|A|781
11FV|1|C|U|782
11FV|1|C|U|783
11FV|1|C|A|784
11FV|1|C|G|785
11FV|1|C|A|786
11FV|1|C|U|787
11FV|1|C|A|788
11FV|1|C|C|789
11FV|1|C|C|790
Current chains
- Chain C
- 16S ribosomal RNA
Nearby chains
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
- Chain r
- 30S ribosomal protein S11
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