HL_11FV_081
3D structure
- PDB id
- 11FV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-S3.3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUG(6MZ)AGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 11FV|1|I|6MZ|2030, 11FV|1|I|A|2031, 11FV|1|I|G|2032
- QA status
- Modified nucleotides: 6MZ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11FV_081 not in the Motif Atlas
- Homologous match to HL_7A0S_049
- Geometric discrepancy: 0.2394
- The information below is about HL_7A0S_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.2
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
11FV|1|I|G|2027
11FV|1|I|U|2028
11FV|1|I|G|2029
11FV|1|I|6MZ|2030
11FV|1|I|A|2031
11FV|1|I|G|2032
11FV|1|I|A|2033
11FV|1|I|U|2034
11FV|1|I|G|2035
11FV|1|I|C|2036
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain L
- Large ribosomal subunit protein uL3
- Chain i
- 50S ribosomal protein L32
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