HL_11GG_023

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

11GG|1|C|U|1024

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_11GG_023 not in the Motif Atlas

Geometric match to HL_9H3G_069

Geometric discrepancy: 0.2463

The information below is about HL_9H3G_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

11GG|1|C|C|1022
11GG|1|C|U|1023
11GG|1|C|U|1024
11GG|1|C|C|1025
11GG|1|C|G|1026
11GG|1|C|G|1027

Current chains

Chain C

16S ribosomal RNA

Nearby chains