HL_11GG_069

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

11GG|1|I|A|1535

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_11GG_069 not in the Motif Atlas

Geometric match to HL_3V7E_005

Geometric discrepancy: 0.3487

The information below is about HL_3V7E_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

11GG|1|I|C|1533
11GG|1|I|U|1534
11GG|1|I|A|1535
11GG|1|I|C|1536
11GG|1|I|G|1537
11GG|1|I|G|1538

Current chains

Chain I

23S ribosomal RNA

Nearby chains