HL_11GG_072

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

AGAGAAU

Length

7 nucleotides

Bulged bases

11GG|1|I|A|1634

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_11GG_072 not in the Motif Atlas

Geometric match to HL_8B0X_069

Geometric discrepancy: 0.1031

The information below is about HL_8B0X_069

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

11GG|1|I|A|1630
11GG|1|I|G|1631
11GG|1|I|A|1632
11GG|1|I|G|1633
11GG|1|I|A|1634
11GG|1|I|A|1635
11GG|1|I|U|1636

Current chains

Chain I

23S ribosomal RNA

Nearby chains