HL_11GG_073

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

11GG|1|I|U|1693

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_11GG_073 not in the Motif Atlas

Homologous match to HL_7A0S_042

Geometric discrepancy: 0.1166

The information below is about HL_7A0S_042

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

11GG|1|I|C|1691
11GG|1|I|U|1692
11GG|1|I|U|1693
11GG|1|I|C|1694
11GG|1|I|G|1695
11GG|1|I|G|1696

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain C

Small subunit ribosomal RNA; SSU rRNA

Chain K

50S ribosomal protein L2