HL_11GG_090

3D structure

PDB id

11GG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chimeric Escherichia coli 70S ribosome containing an evolved 16S rRNA from Pseudomonas aeruginosa (PA-ST)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

GAGUUCAUAUC

Length

11 nucleotides

Bulged bases

11GG|1|I|U|2473, 11GG|1|I|C|2475

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11GG|1|I|G|2470
11GG|1|I|A|2471
11GG|1|I|G|2472
11GG|1|I|U|2473
11GG|1|I|U|2474
11GG|1|I|C|2475
11GG|1|I|A|2476
11GG|1|I|U|2477
11GG|1|I|A|2478
11GG|1|I|U|2479
11GG|1|I|C|2480

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain O

Large ribosomal subunit protein uL6

Chain U

Large ribosomal subunit protein uL16

Chain m

50S ribosomal protein L36