HL_11HV_009
3D structure
- PDB id
- 11HV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 60S ribosomal subunit with eEF2 domain IV open
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGUAAACUCC
- Length
- 10 nucleotides
- Bulged bases
- 11HV|1|28|G|315, 11HV|1|28|U|316
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_11HV_009 not in the Motif Atlas
- Homologous match to HL_8GLP_009
- Geometric discrepancy: 0.0483
- The information below is about HL_8GLP_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_00911.4
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
11HV|1|28|G|314
11HV|1|28|G|315
11HV|1|28|U|316
11HV|1|28|A|317
11HV|1|28|A|318
11HV|1|28|A|319
11HV|1|28|C|320
11HV|1|28|U|321
11HV|1|28|C|322
11HV|1|28|C|323
Current chains
- Chain 28
- 28S rRNA
Nearby chains
- Chain 13
- Large ribosomal subunit protein eL13
- Chain 15
- 60S ribosomal protein L15
- Chain 36
- 60S ribosomal protein L36
- Chain 42
- eL42
- Chain dd
- 60S ribosomal protein L27a
- Chain u
- 60S ribosomal protein L10a
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