HL_11HV_032

3D structure

PDB id

11HV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 60S ribosomal subunit with eEF2 domain IV open

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_11HV_032 not in the Motif Atlas

Homologous match to HL_8GLP_039

Geometric discrepancy: 0.2557

The information below is about HL_8GLP_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

11HV|1|28|C|2561
11HV|1|28|G|2562
11HV|1|28|C|2563
11HV|1|28|G|2564
11HV|1|28|A|2565
11HV|1|28|G|2566

Current chains

Chain 28

28S rRNA

Nearby chains